Skip to content
GitLab
Projects
Groups
Snippets
/
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Sign in
Toggle navigation
Menu
Gitlab will go into maintenance Friday 3rd February from 9:00 to 10:00
Open sidebar
Laura Denies
PathoFact
Commits
3f1dde60
Commit
3f1dde60
authored
Apr 21, 2020
by
Valentina Galata
Browse files
updated VirStorter.yaml (issue
#21
)
parent
d33a661b
Changes
1
Hide whitespace changes
Inline
Side-by-side
envs/VirSorter.yaml
100755 → 100644
View file @
3f1dde60
name
:
virsorter
channels
:
-
bioconda/label/cf201901
-
conda-forge
-
bioconda
-
conda-forge
-
defaults
dependencies
:
-
_libgcc_mutex=0.1=main
-
blast=2.9.0=h20b68b9_1
-
boost=1.68.0=py37h8619c78_1001
-
boost-cpp=1.68.0=h11c811c_1000
-
bzip2=1.0.8=h516909a_1
-
ca-certificates=2019.9.11=hecc5488_0
-
cairo=1.16.0=h18b612c_1001
-
certifi=2019.9.11=py37_0
-
clustalw=2.1=h2d50403_2
-
curl=7.65.3=hf8cf82a_0
-
_libgcc_mutex=0.1=conda_forge
-
_openmp_mutex=4.5=0_gnu
-
blast=2.9.0=pl526h3066fca_4
-
bzip2=1.0.8=h516909a_2
-
ca-certificates=2020.4.5.1=hecc5488_0
-
curl=7.69.1=h33f0ec9_0
-
diamond=0.9.14=hd28b015_2
-
expat=2.2.5=he1b5a44_1003
-
fontconfig=2.13.1=he4413a7_1000
-
freetype=2.10.0=he983fc9_1
-
fribidi=1.0.5=h516909a_1002
-
gettext=0.19.8.1=hc5be6a0_1002
-
giflib=5.1.9=h516909a_0
-
glib=2.58.3=h6f030ca_1002
-
gmp=6.1.2=hf484d3e_1000
-
gnutls=3.6.5=hd3a4fd2_1002
-
graphite2=1.3.13=hf484d3e_1000
-
graphviz=2.40.1=h0f2764d_1
-
harfbuzz=2.4.0=h37c48d4_1
-
entrez-direct=13.3=pl526h375a9b1_0
-
expat=2.2.9=he1b5a44_2
-
hmmer=3.1b2=3
-
icu=58.2=hf484d3e_1000
-
jpeg=9c=h14c3975_1001
-
krb5=1.16.3=h05b26f9_1001
-
libblas=3.8.0=12_openblas
-
libcblas=3.8.0=12_openblas
-
libcurl=7.65.3=hda55be3_0
-
libdb=6.1.26=0
-
krb5=1.17.1=h2fd8d38_0
-
libcurl=7.69.1=hf7181ac_0
-
libedit=3.1.20170329=hf8c457e_1001
-
libffi=3.2.1=he1b5a44_1006
-
libgcc=7.2.0=h69d50b8_2
-
libgcc-ng=9.1.0=hdf63c60_0
-
libgd=2.2.5=h0d07dcb_1005
-
libgfortran-ng=7.3.0=hdf63c60_0
-
libiconv=1.15=h516909a_1005
-
liblapack=3.8.0=12_openblas
-
libopenblas=0.3.7=h6e990d7_1
-
libpng=1.6.37=hed695b0_0
-
libgcc-ng=9.2.0=h24d8f2e_2
-
libgomp=9.2.0=h24d8f2e_2
-
libssh2=1.8.2=h22169c7_2
-
libstdcxx-ng=9.1.0=hdf63c60_0
-
libtiff=4.0.10=h57b8799_1003
-
libtool=2.4.6=h14c3975_1002
-
libuuid=2.32.1=h14c3975_1000
-
libwebp=1.0.2=h576950b_1
-
libxcb=1.13=h14c3975_1002
-
libxml2=2.9.9=h13577e0_2
-
libxslt=1.1.33=h7d1a2b0_0
-
lz4-c=1.8.3=he1b5a44_1001
-
mcl=14.137=pl526h470a237_4
-
metagene_annotator=1.0=h516909a_2
-
muscle=3.8.1551=h6bb024c_4
-
libstdcxx-ng=9.2.0=hdf63c60_2
-
mcl=14.137=pl526h516909a_5
-
metagene_annotator=1.0=h516909a_3
-
muscle=3.8.1551=hc9558a2_5
-
ncurses=6.1=hf484d3e_1002
-
nettle=3.4.1=h1bed415_1002
-
numpy=1.17.2=py37h95a1406_0
-
openssl=1.1.1c=h516909a_0
-
paml=4.9=h470a237_3
-
pango=1.42.4=ha030887_1
-
pcre=8.41=hf484d3e_1003
-
openssl=1.1.1f=h516909a_0
-
pcre=8.44=he1b5a44_0
-
perl=5.26.2=h516909a_1006
-
perl-aceperl=1.92=pl526_2
-
perl-algorithm-diff=1.1903=pl526_2
-
perl-algorithm-munkres=0.08=pl526_1
-
perl-apache-test=1.40=pl526_1
-
perl-app-cpanminus=1.7044=pl526_1
-
perl-appconfig=1.71=pl526_1
-
perl-archive-tar=2.32=pl526_0
-
perl-array-compare=3.0.1=pl526_1
-
perl-autoloader=5.74=pl526_1
-
perl-base=2.23=pl526_1
-
perl-bio-asn1-entrezgene=1.73=pl526_0
-
perl-bio-coordinate=1.007001=pl526_0
-
perl-bio-featureio=1.6.905=pl526_1
-
perl-bio-phylo=0.58=pl526_1
-
perl-bio-samtools=1.43=pl526h1341992_1
-
perl-bio-tools-phylo-paml=1.7.3=pl526_0
-
perl-bio-tools-run-alignment-clustalw=1.7.4=pl526_0
-
perl-bio-tools-run-alignment-tcoffee=1.7.4=pl526_0
-
perl-bioperl=1.7.2=pl526_8
-
perl-bioperl-core=1.7.2=pl526_3
-
perl-bioperl-run=1.007002=pl526_3
-
perl-bioperl=1.6.924=4
-
perl-business-isbn=3.004=pl526_0
-
perl-business-isbn-data=20140910.003=pl526_0
-
perl-cache-cache=1.08=pl526_0
-
perl-capture-tiny=0.48=pl526_0
-
perl-carp=1.38=pl526_3
-
perl-cgi=4.40=pl526h470a237_0
-
perl-class-data-inheritable=0.08=pl526_1
-
perl-class-inspector=1.32=pl526_0
-
perl-class-load=0.25=pl526_0
-
perl-class-load-xs=0.10=pl526h6bb024c_2
-
perl-class-method-modifiers=2.12=pl526_0
-
perl-clone=0.41=pl526h470a237_0
-
perl-common-sense=3.74=pl526_2
-
perl-compress-raw-bzip2=2.087=pl526he1b5a44_0
-
perl-compress-raw-zlib=2.087=pl526hc9558a2_0
-
perl-constant=1.33=pl526_1
-
perl-convert-binary-c=0.78=pl526h2d50403_2
-
perl-convert-binhex=1.125=pl526_1
-
perl-crypt-rc4=2.02=pl526_1
-
perl-data-dumper=2.173=pl526_0
-
perl-data-optlist=0.110=pl526_2
-
perl-data-stag=0.14=pl526_1
-
perl-date-format=2.30=pl526_1
-
perl-db-file=1.843=pl526h470a237_0
-
perl-dbd-sqlite=1.60=pl526h470a237_0
-
perl-dbi=1.642=pl526_0
-
perl-devel-globaldestruction=0.14=pl526_0
-
perl-devel-overloadinfo=0.005=pl526_0
-
perl-devel-stacktrace=2.04=pl526_0
-
perl-digest-hmac=1.03=pl526_
2
-
perl-digest-hmac=1.03=pl526_
3
-
perl-digest-md5=2.55=pl526_0
-
perl-digest-perl-md5=1.9=pl526_1
-
perl-digest-sha1=2.13=pl526h2d50403_0
-
perl-dist-checkconflicts=0.11=pl526_2
-
perl-dynaloader=1.25=pl526_1
-
perl-email-date-format=1.005=pl526_1
-
perl-encode=2.88=pl526_1
-
perl-encode-locale=1.05=pl526_6
-
perl-error=0.17027=pl526_0
-
perl-eval-closure=0.14=pl526h6bb024c_4
-
perl-exception-class=1.44=pl526_0
-
perl-exporter=5.72=pl526_1
-
perl-exporter-tiny=1.002001=pl526_0
-
perl-extutils-makemaker=7.36=pl526_1
-
perl-file-listing=6.04=pl526_1
-
perl-file-path=2.16=pl526_0
-
perl-file-slurp-tiny=0.004=pl526_1
-
perl-file-sort=1.01=pl526_2
-
perl-file-temp=0.2304=pl526_2
-
perl-file-which=1.23=pl526_0
-
perl-font-afm=1.20=pl526_2
-
perl-font-ttf=1.06=pl526_0
-
perl-gd=2.70=pl526he941832_0
-
perl-getopt-long=2.50=pl526_1
-
perl-graph=0.9704=pl526_1
-
perl-graphviz=2.24=pl526h734ff71_0
-
perl-html-element-extended=1.18=pl526_1
-
perl-html-entities-numbered=0.04=pl526_1
-
perl-html-formatter=2.16=pl526_0
-
perl-html-parser=3.72=pl526h2d50403_4
-
perl-html-tableextract=2.13=pl526_2
-
perl-html-parser=3.72=pl526h6bb024c_5
-
perl-html-tagset=3.20=pl526_3
-
perl-html-tidy=1.60=pl526_0
-
perl-html-tree=5.07=pl526_0
-
perl-html-treebuilder-xpath=0.14=pl526_1
-
perl-html-tree=5.07=pl526_1
-
perl-http-cookies=6.04=pl526_0
-
perl-http-daemon=6.01=pl526_1
-
perl-http-date=6.02=pl526_3
-
perl-http-message=6.18=pl526_0
-
perl-http-negotiate=6.01=pl526_2
-
perl-image-info=1.38=pl526_1
-
perl-image-size=3.300=pl526_2
-
perl-http-negotiate=6.01=pl526_3
-
perl-io-compress=2.087=pl526he1b5a44_0
-
perl-io-html=1.001=pl526_2
-
perl-io-sessiondata=1.03=pl526_1
-
perl-io-socket-ssl=2.060=pl526_0
-
perl-io-string=1.08=pl526_3
-
perl-io-stringy=2.111=pl526_1
-
perl-io-tty=1.12=pl526_1
-
perl-io-socket-ssl=2.066=pl526_0
-
perl-io-zlib=1.10=pl526_2
-
perl-ipc-run=20180523.0=pl526_0
-
perl-ipc-sharelite=0.17=pl526h2d50403_0
-
perl-jcode=2.07=pl526_1
-
perl-json=4.02=pl526_0
-
perl-json-xs=2.34=pl526h6bb024c_3
-
perl-lib=0.63=pl526_1
-
perl-libwww-perl=6.36=pl526_0
-
perl-libxml-perl=0.08=pl526_2
-
perl-libwww-perl=6.39=pl526_0
-
perl-list-moreutils=0.428=pl526_1
-
perl-list-moreutils-xs=0.428=pl526_0
-
perl-lwp-mediatypes=6.0
2
=pl526_
3
-
perl-lwp-mediatypes=6.0
4
=pl526_
0
-
perl-lwp-protocol-https=6.07=pl526_4
-
perl-lwp-simple=6.15=pl526h470a237_4
-
perl-mailtools=2.20=pl526_0
-
perl-math-cdf=0.1=pl526h470a237_4
-
perl-math-derivative=1.01=pl526_0
-
perl-math-random=0.72=pl526_1
-
perl-math-spline=0.02=pl526_2
-
perl-mime-base64=3.15=pl526_1
-
perl-mime-lite=3.030=pl526_1
-
perl-mime-tools=5.508=pl526_0
-
perl-mime-types=2.17=pl526_0
-
perl-mldbm=2.05=pl526_1
-
perl-module-implementation=0.09=pl526_2
-
perl-module-runtime=0.016=pl526_1
-
perl-module-runtime-conflicts=0.003=pl526_0
-
perl-moo=2.003004=pl526_0
-
perl-moose=2.2011=pl526hf484d3e_1
-
perl-mozilla-ca=20180117=pl526_
0
-
perl-mozilla-ca=20180117=pl526_
1
-
perl-mro-compat=0.13=pl526_0
-
perl-net-http=6.18=pl526_0
-
perl-net-ssleay=1.74=0
-
perl-ntlm=1.09=pl526_3
-
perl-ole-storage_lite=0.19=pl526_2
-
perl-net-http=6.19=pl526_0
-
perl-net-ssleay=1.88=pl526h90d6eec_0
-
perl-ntlm=1.09=pl526_4
-
perl-package-deprecationmanager=0.17=pl526_0
-
perl-package-stash=0.38=pl526hf484d3e_1
-
perl-package-stash-xs=0.28=pl526hf484d3e_1
-
perl-parallel-forkmanager=2.02=pl526_0
-
perl-params-util=1.07=pl526h6bb024c_4
-
perl-parent=0.236=pl526_1
-
perl-parse-recdescent=1.967015=pl526_0
-
perl-pathtools=3.75=pl526h14c3975_1
-
perl-pdf-api2=2.033=pl526_0
-
perl-pod-escapes=1.07=pl526_1
-
perl-pod-usage=1.69=pl526_1
-
perl-postscript=0.06=pl526_2
-
perl-role-tiny=2.000008=pl526_0
-
perl-scalar-list-utils=1.52=pl526h516909a_0
-
perl-set-scalar=1.29=pl526_2
-
perl-soap-lite=1.19=pl526_1
-
perl-socket=2.027=pl526_1
-
perl-sort-naturally=1.03=pl526_1
-
perl-spreadsheet-parseexcel=0.65=pl526_2
-
perl-spreadsheet-writeexcel=2.40=pl526_1
-
perl-statistics-descriptive=3.0702=pl526_0
-
perl-storable=3.15=pl526h14c3975_0
-
perl-sub-exporter=0.987=pl526_2
-
perl-sub-exporter-progressive=0.001013=pl526_0
...
...
@@ -230,78 +109,22 @@ dependencies:
-
perl-sub-install=0.928=pl526_2
-
perl-sub-name=0.21=pl526_1
-
perl-sub-quote=2.006003=pl526_1
-
perl-sub-uplevel=0.2800=pl526h470a237_0
-
perl-svg=2.84=pl526_0
-
perl-svg-graph=0.02=pl526_2
-
perl-task-weaken=1.06=pl526_0
-
perl-template-toolkit=2.26=pl526_1
-
perl-test=1.26=pl526_1
-
perl-test-deep=1.128=pl526_0
-
perl-test-differences=0.64=pl526_2
-
perl-test-exception=0.43=pl526_2
-
perl-test-harness=3.42=pl526_0
-
perl-test-leaktrace=0.16=pl526_1
-
perl-test-most=0.35=pl526_0
-
perl-test-requiresinternet=0.05=pl526_0
-
perl-test-warn=0.36=pl526_0
-
perl-text-diff=1.45=pl526_0
-
perl-threaded=5.26.0=0
-
perl-tie-ixhash=1.23=pl526_2
-
perl-time-hires=1.9758=pl526_0
-
perl-time-local=1.28=pl526_1
-
perl-timedate=2.30=pl526_1
-
perl-tree-dag_node=1.31=pl526_0
-
perl-try-tiny=0.30=pl526_1
-
perl-type-tiny=1.004004=pl526_0
-
perl-types-serialiser=1.0=pl526_2
-
perl-unicode-map=0.112=pl526h2d50403_2
-
perl-uri=1.76=pl526_0
-
perl-www-robotrules=6.02=pl526_3
-
perl-xml-dom=1.46=pl526_0
-
perl-xml-dom-xpath=0.14=pl526_1
-
perl-xml-filter-buffertext=1.01=pl526_2
-
perl-xml-libxml=2.0132=pl526hbc14f71_0
-
perl-xml-libxslt=1.94=pl526_1
-
perl-xml-namespacesupport=1.12=pl526_0
-
perl-xml-parser=2.44=pl526h3a4f0e9_6
-
perl-xml-regexp=0.04=pl526_2
-
perl-xml-sax=1.00=pl526_0
-
perl-xml-parser=2.44_01=pl526ha1d75be_1002
-
perl-xml-sax=1.02=pl526_0
-
perl-xml-sax-base=1.09=pl526_0
-
perl-xml-sax-expat=0.51=pl526_2
-
perl-xml-sax-writer=0.57=pl526_0
-
perl-xml-simple=2.25=pl526_0
-
perl-xml-twig=3.52=pl526_1
-
perl-xml-writer=0.625=pl526_2
-
perl-xml-xpath=1.44=pl526_0
-
perl-xml-xpathengine=0.14=pl526_2
-
perl-xml-sax-expat=0.51=pl526_3
-
perl-xml-simple=2.25=pl526_1
-
perl-xsloader=0.24=pl526_0
-
perl-yaml=1.29=pl526_0
-
pip=19.2.3=py37_0
-
pixman=0.38.0=h516909a_1003
-
pthread-stubs=0.4=h14c3975_1001
-
python=3.7.3=h33d41f4_1
-
readline=8.0=hf8c457e_0
-
setuptools=41.2.0=py37_0
-
sqlite=3.29.0=hcee41ef_1
-
t_coffee=11.0.8=py37hea885bf_8
-
tidyp=1.04=1
-
tk=8.6.9=hed695b0_1003
-
wheel=0.33.6=py37_0
-
xorg-kbproto=1.0.7=h14c3975_1002
-
xorg-libice=1.0.10=h516909a_0
-
xorg-libsm=1.2.3=h84519dc_1000
-
xorg-libx11=1.6.8=h516909a_0
-
xorg-libxau=1.0.9=h14c3975_0
-
xorg-libxdmcp=1.1.3=h516909a_0
-
xorg-libxext=1.3.4=h516909a_0
-
xorg-libxpm=3.5.12=h516909a_1002
-
xorg-libxrender=0.9.10=h516909a_1002
-
xorg-libxt=1.1.5=h516909a_1003
-
xorg-renderproto=0.11.1=h14c3975_1002
-
xorg-xextproto=7.3.0=h14c3975_1002
-
xorg-xproto=7.0.31=h14c3975_1007
-
xz=5.2.4=h14c3975_1001
-
tk=8.6.10=hed695b0_0
-
virsorter=1.0.5=pl526h516909a_4
-
zlib=1.2.11=h516909a_1006
-
zstd=1.4.0=h3b9ef0a_0
prefix
:
/home/users/ldenies/apps/miniconda3/envs/virsorter
Write
Preview
Supports
Markdown
0%
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment