Commit 0092106b authored by Valentina Galata's avatar Valentina Galata
Browse files

updated set-up.sh (issue #17, #19, #20, #21)

parent a6b1735e
#!/bin/bash -l
cd scripts
# remove possible empty folders at start
rm -rf VirSorter PlasFlow
# Install deepARG (https://bitbucket.org/gusphdproj/deeparg-ss/src/master/)
#git clone https://gaarangoa@bitbucket.org/gusphdproj/deeparg-ss.git
# Install PlasFlow (https://github.com/smaegol/PlasFlow)
git clone https://github.com/smaegol/PlasFlow
#Install DeepVirFinder (https://github.com/jessieren/DeepVirFinder)
#git clone https://github.com/jessieren/DeepVirFinder.git
#Install VirSorter (https://github.com/simroux/VirSorter)
git clone https://github.com/simroux/VirSorter.git
cd VirSorter/Scripts
make clean
make
###########
# DeepARG #
###########
......
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