rgi.yaml 4.37 KB
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name: rgi
channels:
  - bioconda
  - conda-forge
  - defaults
dependencies:
  - _libgcc_mutex=0.1=conda_forge
  - _openmp_mutex=4.5=1_llvm
  - bamtools=2.5.1=he860b03_5
  - bedtools=2.29.2=hc088bd4_0
  - biopython=1.72=py36h14c3975_1000
  - blast=2.9.0=pl526h3066fca_4
  - bowtie2=2.4.1=py36h7f0b59b_2
  - bwa=0.7.17=hed695b0_7
  - bzip2=1.0.8=h516909a_2
  - ca-certificates=2020.4.5.2=hecda079_0
  - certifi=2020.4.5.2=py36h9f0ad1d_0
  - curl=7.69.1=h33f0ec9_0
  - cycler=0.10.0=py_2
  - diamond=0.8.36=h8b12597_4
  - entrez-direct=13.3=pl526h375a9b1_0
  - expat=2.2.9=he1b5a44_2
  - filetype=1.0.7=pyh9f0ad1d_0
  - freetype=2.10.2=he06d7ca_0
  - icu=64.2=he1b5a44_1
  - kiwisolver=1.2.0=py36hdb11119_0
  - krb5=1.17.1=h2fd8d38_0
  - ld_impl_linux-64=2.34=h53a641e_5
  - libblas=3.8.0=16_openblas
  - libcblas=3.8.0=16_openblas
  - libcurl=7.69.1=hf7181ac_0
  - libdeflate=1.0=h14c3975_1
  - libedit=3.1.20191231=h46ee950_0
  - libffi=3.2.1=he1b5a44_1007
  - libgcc-ng=9.2.0=h24d8f2e_2
Laura Denies's avatar
Laura Denies committed
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  - libgfortran-ng=7.5.0
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  - liblapack=3.8.0=16_openblas
  - libopenblas=0.3.9=h5ec1e0e_0
  - libpng=1.6.37=hed695b0_1
  - libssh2=1.9.0=hab1572f_2
  - libstdcxx-ng=9.2.0=hdf63c60_2
  - llvm-openmp=10.0.0=hc9558a2_0
  - matplotlib-base=3.2.1=py36hb8e4980_0
  - ncurses=6.1=hf484d3e_1002
  - numpy=1.18.5=py36h7314795_0
  - oligoarrayaux=3.8=hc9558a2_0
  - openssl=1.1.1g=h516909a_0
  - pandas=1.0.4=py36h830a2c2_0
  - patsy=0.5.1=py_0
  - pcre=8.44=he1b5a44_0
  - perl=5.26.2=h516909a_1006
  - perl-app-cpanminus=1.7044=pl526_1
  - perl-archive-tar=2.32=pl526_0
  - perl-base=2.23=pl526_1
  - perl-business-isbn=3.004=pl526_0
  - perl-business-isbn-data=20140910.003=pl526_0
  - perl-carp=1.38=pl526_3
  - perl-common-sense=3.74=pl526_2
  - perl-compress-raw-bzip2=2.087=pl526he1b5a44_0
  - perl-compress-raw-zlib=2.087=pl526hc9558a2_0
  - perl-constant=1.33=pl526_1
  - perl-data-dumper=2.173=pl526_0
  - perl-digest-hmac=1.03=pl526_3
  - perl-digest-md5=2.55=pl526_0
  - perl-encode=2.88=pl526_1
  - perl-encode-locale=1.05=pl526_6
  - perl-exporter=5.72=pl526_1
  - perl-exporter-tiny=1.002001=pl526_0
  - perl-extutils-makemaker=7.36=pl526_1
  - perl-file-listing=6.04=pl526_1
  - perl-file-path=2.16=pl526_0
  - perl-file-temp=0.2304=pl526_2
  - perl-html-parser=3.72=pl526h6bb024c_5
  - perl-html-tagset=3.20=pl526_3
  - perl-html-tree=5.07=pl526_1
  - perl-http-cookies=6.04=pl526_0
  - perl-http-daemon=6.01=pl526_1
  - perl-http-date=6.02=pl526_3
  - perl-http-message=6.18=pl526_0
  - perl-http-negotiate=6.01=pl526_3
  - perl-io-compress=2.087=pl526he1b5a44_0
  - perl-io-html=1.001=pl526_2
  - perl-io-socket-ssl=2.066=pl526_0
  - perl-io-zlib=1.10=pl526_2
  - perl-json=4.02=pl526_0
  - perl-json-xs=2.34=pl526h6bb024c_3
  - perl-libwww-perl=6.39=pl526_0
  - perl-list-moreutils=0.428=pl526_1
  - perl-list-moreutils-xs=0.428=pl526_0
  - perl-lwp-mediatypes=6.04=pl526_0
  - perl-lwp-protocol-https=6.07=pl526_4
  - perl-mime-base64=3.15=pl526_1
  - perl-mozilla-ca=20180117=pl526_1
  - perl-net-http=6.19=pl526_0
  - perl-net-ssleay=1.88=pl526h90d6eec_0
  - perl-ntlm=1.09=pl526_4
  - perl-parent=0.236=pl526_1
  - perl-pathtools=3.75=pl526h14c3975_1
  - perl-scalar-list-utils=1.52=pl526h516909a_0
  - perl-socket=2.027=pl526_1
  - perl-storable=3.15=pl526h14c3975_0
  - perl-test-requiresinternet=0.05=pl526_0
  - perl-time-local=1.28=pl526_1
  - perl-try-tiny=0.30=pl526_1
  - perl-types-serialiser=1.0=pl526_2
  - perl-uri=1.76=pl526_0
  - perl-www-robotrules=6.02=pl526_3
  - perl-xml-namespacesupport=1.12=pl526_0
  - perl-xml-parser=2.44=pl526h4e0c4b3_7
  - perl-xml-sax=1.02=pl526_0
  - perl-xml-sax-base=1.09=pl526_0
  - perl-xml-sax-expat=0.51=pl526_3
  - perl-xml-simple=2.25=pl526_1
  - perl-xsloader=0.24=pl526_0
  - pip=20.1.1=py_1
  - prodigal=2.6.3=h516909a_2
  - pyahocorasick=1.4.0=py36h8c4c3a4_1
  - pyfaidx=0.5.8=py_1
  - pyparsing=2.4.7=pyh9f0ad1d_0
  - python=3.6.10=h8356626_1011_cpython
  - python-dateutil=2.8.1=py_0
  - python_abi=3.6=1_cp36m
  - pytz=2020.1=pyh9f0ad1d_0
  - readline=8.0=hf8c457e_0
  - rgi=5.1.0=py_1
  - samtools=1.9=h8571acd_11
  - scipy=1.4.1=py36h2d22cac_3
  - seaborn=0.10.1=py_0
  - setuptools=47.1.1=py36h9f0ad1d_0
  - six=1.15.0=pyh9f0ad1d_0
  - sqlite=3.30.1=hcee41ef_0
  - statsmodels=0.11.1=py36h8c4c3a4_1
  - tbb=2020.1=hc9558a2_0
  - tk=8.6.10=hed695b0_0
  - tornado=6.0.4=py36h8c4c3a4_1
  - wheel=0.34.2=py_1
  - xz=5.2.5=h516909a_0
  - zlib=1.2.11=h516909a_1006
prefix: /home/users/ldenies/apps/miniconda3/envs/rgi