Skip to content
GitLab
Projects
Groups
Snippets
/
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Sign in
Toggle navigation
Menu
Gitlab will go into maintenance Friday 3rd February from 9:00 to 10:00
Open sidebar
Jochem Bijlard
fractalis
Commits
dee936c1
Commit
dee936c1
authored
Nov 24, 2017
by
Sascha Herzinger
Browse files
moving some dev dependencies to a requirements.txt and trying to fix gitlab ci
parent
d4586391
Changes
3
Hide whitespace changes
Inline
Side-by-side
.gitlab-ci.yml
View file @
dee936c1
...
...
@@ -5,25 +5,31 @@ variables:
PYPI_PASSWORD
:
SECURE
stages
:
-
setup
-
test
-
publish
-
cleanup
script
:
-
yum install -y epel-release
-
yum update -y
-
yum install -y
rabbitmq-server redis python34 python34-pip python34-dev
el
re
adline-devel R
-
pip3 install -e . -i https://pypi.lcsb.uni.lu/simple
-
R -e 'source("https://bioconductor.org/biocLite.R"); biocLite(); biocLite("limma")'
-
redis-server --daemonize yes
-
rabbitmq-server -detached
-
celery worker -A fractalis:celery -D -l info
install_deps
:
stage
:
setup
script
:
-
yum install -y
ep
el
-
re
lease
-
yum update -y
-
yum install -y rabbitmq-server redis python34 python34-pip python34-devel readline-devel R
-
pip3 install -e . -i https://pypi.lcsb.uni.lu/simple
-
pip3 install -r requirements.txt -i https://pypi.lcsb.uni.lu/simple
-
R -e 'source("https://bioconductor.org/biocLite.R"); biocLite(); biocLite("limma")'
tests
:
stage
:
test
script
:
-
redis-server --daemonize yes
-
rabbitmq-server -detached
-
celery worker -A fractalis:celery -D -l info
-
python3 setup.py test
-
flake8
dependencies
:
-
install_deps
release
:
stage
:
publish
...
...
@@ -36,6 +42,8 @@ release:
-
tags
except
:
-
branches
dependencies
:
-
install_deps
rm_secrets
:
stage
:
cleanup
...
...
requirements.txt
0 → 100644
View file @
dee936c1
flake8
jedi
neovim
ipython
ipdb
pytest
pytest-runner
pytest-mock
responses
setup.py
View file @
dee936c1
...
...
@@ -30,15 +30,6 @@ setup(
'requests==2.18.4'
,
'PyYAML==3.12'
,
'pycryptodomex==3.4.7'
,
'rpy2==2.9.0'
,
'flake8==3.4.1'
],
setup_requires
=
[
'pytest-runner==2.12.1'
,
],
tests_require
=
[
'pytest==3.0.3'
,
'pytest-mock==1.6.3'
,
'responses==0.8.1'
'rpy2==2.9.0'
]
)
Write
Preview
Supports
Markdown
0%
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment