From da8c471189a44c16410f6eb4535890dd663a29f0 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Todor=20Kondi=C4=87?= <todor.kondic@uni.lu>
Date: Tue, 5 May 2020 12:22:00 +0200
Subject: [PATCH] R/mix.R Fill defaults for mzml, known, unknown and add out

* R/mix.R(read_conf): Add defaults for mzml, known and unknown. Add
  tab empty list to out in m.
---
 R/mix.R | 5 ++++-
 1 file changed, 4 insertions(+), 1 deletion(-)

diff --git a/R/mix.R b/R/mix.R
index 9bc87ec..30790e4 100644
--- a/R/mix.R
+++ b/R/mix.R
@@ -604,10 +604,13 @@ read_conf <- function(fn) {
     yaml::yaml.load_file(fn)
 }
 
-
 new_state <- function(conf,GUI) {
     m <- list()
     m$conf <- conf
     m$GUI <- GUI
+    m$out$tab <- list()
+    m$input$tab$mzml <- EMPTY_MZML
+    m$input$tab$known <- EMPTY_KNOWN
+    m$input$tab$unknown <- EMPTY_UNKNOWN
     m
 }
-- 
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