diff --git a/R/api.R b/R/api.R index 7735b599ca518a2ce690491252ec2121ffa294e0..9e6dd16f62b48a09cb1961269fa83f1bb6c1b816 100644 --- a/R/api.R +++ b/R/api.R @@ -46,8 +46,7 @@ gen_base_ftab <- function(m) { } ##' @export -load_inputs <- function(m) { - m$input$tab$mzml <- file2tab(m$conf$data) +load_compound_input <- function(m) { m$input$tab$known <- if (shiny::isTruthy(m$conf$compounds$known)) file2tab(m$conf$compounds$known) else EMPTY_KNOWN m$input$tab$unknown <- if (shiny::isTruthy(m$conf$compounds$unknown)) @@ -58,6 +57,18 @@ load_inputs <- function(m) { m } +load_data_input <- function(m) { + m$input$tab$mzml <- file2tab(m$conf$data) + m +} + +##' @export +load_inputs <- function(m) { + m <- load_compound_inputs(m) + m <- load_data_input(m) + m +} + ##' @export mk_comp_tab <- function(m) { message("Started assembling the lists of knowns and unknowns into the `comprehensive' table.")