Commit 13422631 authored by Emma Schymanski's avatar Emma Schymanski
Browse files

Updated S74 mappings

...with new datasets added earlier.
parent 500b6d0f
......@@ -73,7 +73,7 @@ https://zenodo.org/record/3894828/files/S70_EISUSGCEIMS_InChIKeys.txt S70 | EISU
https://zenodo.org/record/3956587/files/HBM4EU_CECscreen_DB_InChIKeys_v3.1.txt S71 | CECSCREEN | HBM4EU CECscreen: Screening List for Chemicals of Emerging Concern "HBM4EU CECscreen is a suspect screening list for Chemicals of Emerging Concern (CECs) plus metadata and predicted Phase 1 metabolites; this list contains the CECs only. CECScreen is part of the HBM4EU project (coord. UBA) > WP16 ""emerging chemicals"" (lead INRA, JP Antignac/L Debrauwer) > Task 16.1 (lead IRAS, J Vlanderen / R Vermeulen) > Main contributor (J Meijer) > Involved Partners (M Lamoree, T Hamers, S Hutinet, A, Covaci, C Huber, M Krauss, DI Walker, EL Schymanski). Further details in Meijer et al (2021) DOI: 10.1016/j.envint.2021.106511. Dataset DOI: 10.5281/zenodo.3956586" HBM yes med Related data in multiple files
https://zenodo.org/record/3955665/files/NTUPHTW_InChIKeys.txt S72 | NTUPHTW | Pharmaceutically Active Substances from National Taiwan University "A suspect list based on Agilent PCDLs containing pharmaceutically active substances from the College of Public Health, National Taiwan University, kindly provided by Wen-Ling Chen, details in Chen et al (2021) DOI: 10.1016/j.scitotenv.2020.141519. Dataset DOI: 10.5281/zenodo.3955664" Pharma|Vet yes done Done
https://zenodo.org/record/4247792/files/MetXBioDB_InChIKeys.txt S73 | METXBIODB | Metabolite Reaction Database from BioTransformer "The Metabolite Reaction Database, MetXBioDB, is a biotransformation database used to improve the knowledge- and machine learning-based systems of BioTransformer (http://biotransformer.ca/) by Djoumbou-Feunang et al (2019), DOI: 10.1186/s13321-018-0324-5. Dataset DOI: 10.5281/zenodo.4056560" TPs yes high Done
https://zenodo.org/record/5555673/files/S74_REFTPS_InChIKeys.txt S74 | REFTPS | Transformation Products and Reactions from Literature This dataset is designed to provide an entry point for users to contribute transformation products and reactions documented in the literature for addition to the NORMAN SLE and PubChem Transformations section. Dataset DOI: 10.5281/zenodo.4318838 TPs no med work in progress
https://zenodo.org/record/5597971/files/S74_REFTPS_InChIKeys.txt S74 | REFTPS | Transformation Products and Reactions from Literature This dataset is designed to provide an entry point for users to contribute transformation products and reactions documented in the literature for addition to the NORMAN SLE and PubChem Transformations section. Dataset DOI: 10.5281/zenodo.4318838 TPs no med work in progress
https://zenodo.org/record/4562688/files/CyanoMetDB_v02_InChIKeys.txt S75 | CyanoMetDB | Comprehensive database of secondary metabolites from cyanobacteria "CyanoMetDB is a comprehensive database of secondary metabolites from cyanobacteria manually curated from primary references described in Jones et al (2021), DOI: 10.1016/j.watres.2021.117017. Dataset DOI: 10.5281/zenodo.4551528" NP|Lit|Toxins yes high Done
https://zenodo.org/record/4587356/files/LUXPHARMA_InChIKeys.txt S76 | LUXPHARMA | Pharmaceuticals Marketed in Luxembourg "Pharmaceuticals marketed in Luxembourg, as published by d'Gesondheetskeess (CNS, la caisse nationale de sante, www.cns.lu), mapped by name to structures using CompTox by R. Singh et al. (in prep.). List downloaded from https://cns.public.lu/en/legislations/textes-coordonnes/liste-med-comm.html. Dataset DOI: 10.5281/zenodo.4587355" Pharma no med Done
https://zenodo.org/record/4660126/files/FCCdb_v5_InChIKeys.txt S77 | FCCDB | Food Contact Chemicals Database v5.0 "The Food Contact Chemicals database (FCCdb, DOI: 10.5281/zenodo.3240108) is a compilation of information on over 12,000 intentionally added food contact chemicals extracted from publicly available sources such as legislation or industry inventories for different types of food contact materials and selected sources of hazard information, as described by Groh et al. 2021 (see DOI: 10.1016/j.envint.2020.106225). Structural information for ~6000 entries where clear mappings could be found was added by P. Chirsir into FCCdb Version 5, prior to hosting it on the NORMAN Suspect List Exchange (see Dataset DOI: 10.5281/zenodo.4625495). Further detailed descriptions for each sub-category in the classification tree can be found in the ReadMe tab of the FCCdb spreadsheet file, or in the respective sub-category tooltips ('?' boxes)." Food yes high work in progress
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......@@ -76,7 +76,7 @@ https://zenodo.org/record/3894828/files/S70_EISUSGCEIMS.csv S70_EISUSGCEIMS S70.
https://zenodo.org/record/3956587/files/HBM4EU_CECscreen_DB_v3.1.csv S71_CECSCREEN S71.0.1.0 22-Jul-20 10.5281/zenodo.3956586 https://www.norman-network.com/nds/SLE/ source_SMILES CompoundName_main|CAS_main 10.1016/j.envint.2021.106511
https://zenodo.org/record/3955665/files/NTUPHTW_20200708.csv S72_NTUPHTW S72.0.1.0 22-Jul-20 10.5281/zenodo.3955664 https://www.norman-network.com/nds/SLE/ SMILES InChIKey Name|IUPAC_Name|CAS 10.1016/j.scitotenv.2020.141519
https://zenodo.org/record/4247792/files/MetXBioDB_substances.csv S73_METXBIODB S73.0.1.3 5-Nov-20 10.5281/zenodo.4056560 https://www.norman-network.com/nds/SLE/ SMILES InChIKey InChI Name|Synonym|Synonym2 10.1186/s13321-016-0115-9/
https://zenodo.org/record/5555673/files/S74_REFTPS_Substances.csv S74_REFTPS S74.0.3.1 8-Oct-21 10.5281/zenodo.4318838 https://www.norman-network.com/nds/SLE/ SMILES InChIKey Name|Synonym
https://zenodo.org/record/5597971/files/S74_REFTPS_Substances.csv S74_REFTPS S74.0.4.0 25-Oct-21 10.5281/zenodo.4318838 https://www.norman-network.com/nds/SLE/ SMILES InChIKey Name|Synonym
https://zenodo.org/record/4562688/files/CyanoMetDB_WR_Feb2021.csv S75_CYANOMETDB S75.0.1.1 25-Feb-21 10.5281/zenodo.4551528 https://www.norman-network.com/nds/SLE/ CyanoMetDB_Identifier SMILES InChlKey InChI CompoundName_CSV|Synonyms|IUPAC_name 10.1101/2020.04.16.038703 | 10.1016/j.watres.2021.117017
https://zenodo.org/record/4587356/files/LUXPHARMA.csv S76_LUXPHARMA S76.0.1.0 6-Mar-21 10.5281/zenodo.4587355 https://www.norman-network.com/nds/SLE/ SMILES INCHIKEY INCHI_STRING CNS_Numero_National|INPUT|PREFERRED_NAME
https://zenodo.org/record/4660126/files/FCCdb_FINAL_LIST_v5_wStructures.csv S77_FCCDB S77.0.1.1 2-Apr-21 10.5281/zenodo.4625495 https://www.norman-network.com/nds/SLE/ SMILES InChIKey InChI Name|CAS number or CFSAN id 10.1016/j.envint.2020.106225|10.5281/zenodo.4296944
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