ansibleit

+#!/bin/sh
+
+ansible-playbook -i hosts.txt main.yml\
+ --vault-password-file meta/zubizareta\
+ -u root -t $1

files/etc/guix_new_shinyscreen_manifest.scm

+(use-modules (guix packages)
+	     (guix profiles)
+	     (gnu packages)
+	     (srfi srfi-1))
+
+
+
+(specifications->manifest       
+ '( ;; Utilities
+   "recutils"
+   "curl"
+   "git"
+   "git:send-email"
+   "subversion"
+   "bash"
+   "guile"
+   "nano"
+   "nss-certs"
+   "glibc-locales"
+   "gcc-toolchain"
+   "gfortran-toolchain"
+   "python"
+   "perl"
+   "htop"
+   "ansible"
+   "pigz"
+   "libsass"
+
+   ;; Autotools
+   "autoconf"
+   "automake"
+   "autobuild"
+   "m4"
+
+   ;; Emacs
+   "the-silver-searcher"
+   "emacs"
+   "emacs-bbdb"
+   "emacs-use-package"
+   "emacs-ag"
+   "emacs-magit"
+   "emacs-org"
+   "emacs-org-ref"
+   "emacs-paredit"
+   "emacs-ess"
+   "emacs-company"
+   "emacs-ivy"
+   "emacs-counsel"
+   "emacs-geiser"
+   "emacs-guix"
+   "emacs-zenburn-theme"
+   "emacs-solarized-theme"
+   "emacs-cyberpunk-theme"
+   "emacs-atom-one-dark-theme"
+   "emacs-polymode"
+   "emacs-polymode-org"
+   "emacs-polymode-ansible"
+   "emacs-csv"
+   "emacs-smartparens"
+   ;; "emacs-elpy"
+   "emacs-wgrep"
+   "emacs-emojify"
+   "emacs-rust-mode"
+   "emacs-flycheck-rust"
+
+   ;; X
+   "xterm"
+   "rxvt-unicode"
+   "evince"
+   "xdg-utils"
+   "xdg-user-dirs"
+   "pango"
+   "libxft"
+   "cairo"
+
+   ;; TeX
+   "gs-fonts"
+   "texlive"
+   ;; "gs-fonts"
+   ;; "texlive-charter"
+   ;; "texlive-fonts-stmaryrd"
+   ;; "texlive-txfonts"
+   ;; "texlive-amsfonts"
+   ;; "texlive-fonts-latex"
+   ;; "texlive-latex-psnfss"
+   ;; "texlive-latex-type1cm"
+   ;; "texlive-latex-ms"
+   ;; "texlive-fontinst"
+   ;; "texlive-metafont-base"
+   ;; "texlive-latex-fontspec"
+   ;; "texlive-hyph-utf8"
+   ;; "lyx"
+   ;; "texlive-bin"
+   ;; "texlive-base"
+   ;; "texlive-latex-tools"
+   ;; "texlive-latex-base"
+   ;; "texlive-latexconfig"
+   ;; "texlive-dvips"
+   ;; "texlive-fonts-latex"
+   ;; "texlive-latex-babel"
+   ;; "texlive-latex-graphics"
+   ;; "texlive-amsfonts"
+   ;; "texlive-fonts-ec"
+   ;; "texlive-dvips"
+   ;; "texlive-bibtex"
+   ;; "texlive-latex-fancyhdr"
+   ;; "texlive-latex-enumitem"
+   ;; "texlive-latex-ifplatform"
+   ;; "texlive-latex-koma-script"
+   ;; "texlive-url"
+   ;; "texlive-latex-framed"
+   ;; "texlive-latex-geometry"
+   ;; "texlive-latex-hyperref"
+
+   ;;Fonts
+   "unicode-emoji"
+   "fontconfig"
+   "font-dejavu"
+   "font-gnu-freefont"
+   "font-ubuntu"
+   "font-terminus"
+   "font-liberation"
+   "font-inconsolata"
+   "font-gnu-unifont"
+   "font-public-sans"
+   "font-misc-misc"
+   "font-awesome"
+   "font-hack"
+   "font-iosevka"
+   "font-iosevka-term"
+   "font-iosevka-term-slab"
+   "font-iosevka-sparkle"
+   "font-iosevka-slab"
+   "font-iosevka-etoile"
+   "font-iosevka-aile"
+   "font-google-noto"
+
+   ;;Python
+   "python-requests"
+   "python-ruamel.yaml"
+   "python-matplotlib"
+   "python-numpy"
+   "python-scipy"
+
+   ;; Java
+   "openjdk:out"
+   "openjdk:jdk"
+   ;; Perl
+   "perl-yaml-libyaml"
+
+   ;; Guile
+   "guile-readline"
+
+   ;; R
+   "r"
+   "r-curl"
+   "r-ellipsis"
+   "r-remoter"
+   "r-sass"
+   "r-bslib"
+   "r-cachem"
+   "r-future"
+   "r-rmarkdown"
+   "r-knitr"
+   "r-roxygen2"
+   "r-rcolorbrewer"
+   "r-data-table"
+   "r-gplots"
+   "r-devtools"
+   "r-usethis"
+   "r-shiny"
+   "r-shinyfiles"
+   "r-shinydashboard"
+   "r-flexdashboard"
+   "r-handsontable"
+   "r-shinyfiles"
+   "r-cowplot"
+   "r-withr"
+   "r-massbank"
+   "r-chemmass"
+   "r-resolution"
+   "r-msnbase"
+   "r-pander"
+   "r-rstatix"
+   "r-shinyscreen"))

files/home/user/.config/guix/channels.scm

@@ -12,6 +12,7 @@
        (channel
          (name 'guix)
          (url "https://git.savannah.gnu.org/git/guix.git")
+	 (commit "10b909a0249fd53d589890b357232db4165690f5")
 	 ;; (commit "2b5a81dfd3f7a633f4137d31060d0fa82c5e89f6")
          ;; (commit "66c31d5072c846ab86026c5f696ea55a08723ac")
 	 

files/home/user/.local/bin/newss.sh

+#!/bin/sh
+
+# Clear environment, source the profile containing the new shinyscreen
+# and run it.
+
+env -i HOME="$HOME"\
+    USER="$USER"\
+    DISPLAY=":50"\
+    PATH=/usr/local/sbin/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin\
+    bash -c "source  '$HOME'/.prof-ss/etc/profile
+             '$HOME'/.prof-ss/bin/Rscript '$HOME'/.local/bin/run-ss.R"

files/home/user/.local/bin/oldss.sh

+#!/bin/sh
+
+# Clear environment, source the profile containing the new shinyscreen
+# and run it.
+
+Rscript ~/.local/bin/run-olds.R
+
+             

files/home/user/.local/bin/run-olds.R

+require(shinyscreen)
+options(browser="chromium")
+options(shiny.launch.browser=T)
+launch()

files/home/user/.local/bin/run-ss.R

+require(shinyscreen)
+options(browser="chromium")
+app(shiny_args=list(launch.browser=T))

files/home/user/Desktop/newss.desktop

+[Desktop Entry]
+Name=Shinyscreen (devel)
+Comment=Mass-spectrum Prescreening Program
+Icon=r
+Exec=newss.sh
+Type=Application
+Terminal=false

files/home/user/Desktop/oldss.desktop

+[Desktop Entry]
+Name=Shinyscreen (stable ;-) )
+Comment=Mass-spectrum Prescreening Program
+Icon=r
+Exec=oldss.sh
+Type=Application
+Terminal=false

main.yml

@@ -12,7 +12,6 @@
     - name: Set hostname.
       ansible.builtin.hostname:
         name: "{{ inventory_hostname }}"
-
     - name: Copy profiles.
       tags: profile
       copy:
@@ -24,13 +23,19 @@
 
     - include: tasks/apt.yml
     - include: tasks/users.yml
+      tags: users
     - include: tasks/ufw.yml
+    - include: tasks/spaces.yml
+      tags: spaces
     - include: tasks/guix.yml
       tags: guix
     - include: tasks/visual-appeal.yml
       tags: visual
     - include: tasks/emacs.yml
       tags: emacs
+    - include: tasks/r-setup.yml
+      tags: r-setup
+
 
 
   handlers:

tasks/apt.yml

@@ -14,7 +14,8 @@
             'gdm3',
             'xinetd',
             'firefox',
-            'chromium-browser']
+            'chromium-browser',
+            's3fs' ]
   tags: apt
 
 

tasks/guix.yml

@@ -51,6 +51,13 @@
   copy:
     src: files/etc/guix_manifest.scm
     dest: /etc/guix_manifest.scm
+  tags: guix-inst-pkg
+
+- name: Copy "new shinyscreen" package manifest.
+  copy:
+    src: files/etc/guix_new_shinyscreen_manifest.scm
+    dest: /etc/guix_new_shinyscreen_manifest.scm
+  tags: guix-inst-pkg
 
 - name: Install packages.
   command:
@@ -62,3 +69,19 @@
   register: result
   until: result.rc == 0
   loop: "{{ users }}"
+
+- name: Create new shinyscreen profile.
+  command:
+    cmd: >
+      /usr/bin/bash -l -c
+      'guix package -c4 
+      -m /etc/guix_new_shinyscreen_manifest.scm
+      -p "/home/{{ item.login }}/.prof-ss"
+      --fallback'
+  tags: guix-inst-pkg
+  become_user: "{{ item.login }}"
+  retries: 20
+  delay: 5
+  register: result
+  until: result.rc == 0
+  loop: "{{ users }}"

tasks/r-setup.yml

+- name: Copy newss.sh
+  copy:
+    src: files/home/user/.local/bin/newss.sh
+    dest: /home/{{ item.login }}/.local/bin/newss.sh
+    owner: "{{ item.login }}"
+    mode: 0744
+  loop: "{{ users }}"
+
+- name: Copy run-ss.R
+  copy:
+    src: files/home/user/.local/bin/run-ss.R
+    dest: /home/{{ item.login }}/.local/bin/run-ss.R
+    owner: "{{ item.login }}"
+    mode: 0744
+  loop: "{{ users }}"
+
+- name: Copy newss.desktop
+  copy:
+    src: files/home/user/Desktop/newss.desktop
+    dest: /home/{{ item.login }}/Desktop/newss.desktop
+    owner: "{{ item.login }}"
+    mode: 0744
+  loop: "{{ users }}"
+
+
+- name: Copy oldss.sh
+  copy:
+    src: files/home/user/.local/bin/oldss.sh
+    dest: /home/{{ item.login }}/.local/bin/oldss.sh
+    owner: "{{ item.login }}"
+    mode: 0744
+  loop: "{{ users }}"
+
+- name: Copy run-olds.R
+  copy:
+    src: files/home/user/.local/bin/run-olds.R
+    dest: /home/{{ item.login }}/.local/bin/run-olds.R
+    owner: "{{ item.login }}"
+    mode: 0744
+  loop: "{{ users }}"
+
+- name: Copy oldss.desktop
+  copy:
+    src: files/home/user/Desktop/oldss.desktop
+    dest: /home/{{ item.login }}/Desktop/oldss.desktop
+    owner: "{{ item.login }}"
+    mode: 0744
+  loop: "{{ users }}"
+
+  
+
+
+

tasks/spaces.yml

+- name: Upload the access token
+  copy:
+    content: "{{ accesstokens['spaces'] }}"
+    dest: /home/ecitk/.passwd-s3fs
+    mode: 0600
+    owner: ecitk
+
+- name: Make the mount point.
+  file:
+    path: /mnt/exchange
+    state: directory
+    owner: ecitk
+    group: scratch
+    mode: 0770
+
+- name: Mount Spaces URL.
+  command: >
+    s3fs planb /mnt/exchange
+    -o passwd_file=/home/ecitk/.passwd-s3fs
+    -o url=https://ams3.digitaloceanspaces.com/
+    -o use_path_request_style
+    -o use_wtf8
+    -o enable_content_md5
+    -o allow_other
+    -o mp_umask=0007
+    -o umask=0007
+  become_user: ecitk
+

tasks/users.yml

@@ -35,3 +35,12 @@
   ignore_errors: yes
   when: item.sshkey
   loop: "{{ users }}"
+
+- name: Create local bin.
+  file:
+    path: "/home/{{ item.login }}/.local/bin"
+    state: directory
+    recurse: yes
+    owner: "{{ item.login }}"
+    mode: 0750
+  loop: "{{ users }}"

vars/passwords.yml

 $ANSIBLE_VAULT;1.1;AES256
-64386164623735383434343330326637343837653966623066343061626364323139636334346136
-3537663335626461623833333234623134306632623461360a313462656433346537636365393162
-34646334623631626262616666663364616537653561313337313965373337396163666231616638
-3762383834343832350a643164306564303564663033386637323864333866303538356532303963
-35323138616336323632643238303864333535333564346133633539663363303330653233323865
-63613332633564303461656234663336623364346532313631366234653535383664646533333265
-656236343134316264376165323235333838
+30333733393662313736616332346333653462356333393834303232643034383337333963643837
+6534343731313033663436353232616134333839383562370a623030303534656463363630383562
+30313237333531323561376631376330613730336262643562393533393761396330343064313132
+3263393730336531640a383135306261663738636666626562623161393133386163313836663664
+66353630386636383333613062316633383536386363613230383564383362346361653034333830
+66336137326430653463343362666565323661353434353735336461363230303664306463656638
+36383963393434363835333133363234303934313539396435333664343165343135623731313630
+32626331636337663539663935643833383133666638663264303138303930383232336163303830
+37643864363931636333323266663836363164643031333564326163653034643264303636386662
+63353337336461636638623139373336353136343231383830336234396436313538623533353339
+31336465653932343531326563643164333837633066326161306662363333663462333766353430
+62353431366263336362