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Environmental Cheminformatics
plan-b
Commits
f509e69b
Commit
f509e69b
authored
May 21, 2021
by
Todor Kondic
Browse files
Update guix
parent
da062879
Changes
7
Hide whitespace changes
Inline
Side-by-side
files/etc/guix_manifest.scm
View file @
f509e69b
...
...
@@ -182,4 +182,7 @@
"r-msnbase"
"r-pander"
"r-rstatix"
"r-shinyscreen@0.8.1"
))
"r-shinyscreen"
;; WWW
"ungoogled-chromium"
))
files/home/user/.local/bin/chromium-on-guix
0 → 100644
View file @
f509e69b
#!/bin/sh
# Clear environment, source the profile containing the new shinyscreen
# and run it.
env
-i
HOME
=
"
$HOME
"
\
USER
=
"
$USER
"
\
DISPLAY
=
":50"
\
PATH
=
/usr/local/sbin/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
\
bash
-c
"source '
$HOME
'/.guix-profile/etc/profile
'
$HOME
'/.guix-profile/bin/chromium"
files/home/user/.local/bin/emacs-on-guix
0 → 100755
View file @
f509e69b
#!/bin/sh
# Clear environment, source the profile containing the new shinyscreen
# and run it.
env
-i
HOME
=
"
$HOME
"
\
USER
=
"
$USER
"
\
DISPLAY
=
":50"
\
PATH
=
/usr/local/sbin/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
\
bash
-c
"source '
$HOME
'/.guix-profile/etc/profile
'
$HOME
'/.guix-profile/bin/emacs"
files/home/user/.local/bin/newss.sh
View file @
f509e69b
...
...
@@ -7,5 +7,5 @@ env -i HOME="$HOME"\
USER
=
"
$USER
"
\
DISPLAY
=
":50"
\
PATH
=
/usr/local/sbin/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
\
bash
-c
"source '
$HOME
'/.prof
-ss
/etc/profile
'
$HOME
'/.prof
-ss
/bin/Rscript '
$HOME
'/.local/bin/run-ss.R"
bash
-c
"source '
$HOME
'/.
guix-
prof
ile
/etc/profile
'
$HOME
'/.
guix-
prof
ile
/bin/Rscript '
$HOME
'/.local/bin/run-ss.R"
files/home/user/.local/bin/r-on-guix
0 → 100755
View file @
f509e69b
#!/bin/sh
# Clear environment, source the profile containing the new shinyscreen
# and run it.
env
-i
HOME
=
"
$HOME
"
\
USER
=
"
$USER
"
\
DISPLAY
=
":50"
\
PATH
=
/usr/local/sbin/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
\
bash
-c
"source '
$HOME
'/.guix-profile/etc/profile
'
$HOME
'/.guix-profile/bin/R"
files/home/user/.local/bin/rxvt-on-guix
0 → 100755
View file @
f509e69b
#!/bin/sh
# Clear environment, source the profile containing the new shinyscreen
# and run it.
env
-i
HOME
=
"
$HOME
"
\
USER
=
"
$USER
"
\
DISPLAY
=
":50"
\
PATH
=
/usr/local/sbin/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
\
bash
-c
"source '
$HOME
'/.guix-profile/etc/profile
'
$HOME
'/.guix-profile/bin/urxvt"
tasks/guix.yml
View file @
f509e69b
...
...
@@ -56,12 +56,6 @@
dest
:
/etc/guix_manifest.scm
tags
:
guix-inst-pkg
-
name
:
Copy "new shinyscreen" package manifest.
copy
:
src
:
files/etc/guix_new_shinyscreen_manifest.scm
dest
:
/etc/guix_new_shinyscreen_manifest.scm
tags
:
guix-inst-pkg
-
name
:
Install packages.
command
:
cmd
:
/usr/bin/bash -l -c 'guix package -c4 -m /etc/guix_manifest.scm --fallback'
...
...
@@ -72,19 +66,3 @@
register
:
result
until
:
result.rc ==
0
loop
:
"
{{
users
}}"
-
name
:
Create new shinyscreen profile.
command
:
cmd
:
>
/usr/bin/bash -l -c
'guix package -c4
-m /etc/guix_new_shinyscreen_manifest.scm
-p "/home/{{ item.login }}/.prof-ss"
--fallback'
tags
:
guix-inst-pkg
become_user
:
"
{{
item.login
}}"
retries
:
20
delay
:
5
register
:
result
until
:
result.rc ==
0
loop
:
"
{{
users
}}"
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