Commit c00f539f authored by Todor Kondic's avatar Todor Kondic
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Update README.md

parent 18e67fbc
......@@ -100,4 +100,14 @@ treats collections of sratements
The above commands are used when you have a separate R script that is
being evaluated in the session. In the session itself, it's just enter
### Converting Shinyscreen MS2 files to MetFrag compatible format
Assuming `AAs` is the Shinyscreen project folder, to create files
compatible with MetFrag input format follow these steps:
1. Navigate to `AAs` folder using `Thunar` file browser.
2. Right-click somewhere on the white space in the view showing files and click on `Open Terminal Here`.
3. In the terminal, type `ls`. Is there a `MS2` folder in there? If yes, then proceed.
4. Type `ss2mf`. This command will create a `MS2_forMF` folder containing the MetFrag compatible input files.
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