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Matthieu Gobin's avatar
Update 48 files
Matthieu Gobin authored 
- /Data processing and plotting/Enrichment analysis plotting/Environment.RData
- /Data processing and plotting/Enrichment analysis plotting/Visualization_of_enrichment_analysis_.Rmd
- /Data processing and plotting/Figure 1B - GCase activity/Environment.RData
- /Data processing and plotting/Figure 1B - GCase activity/GCase.Rmd
- /Data processing and plotting/Figure 1B - GCase activity/GCase.nb.html
- /Data processing and plotting/Figure 4A - DA ELISA/DA ELISA plots.Rmd
- /Data processing and plotting/Figure 4A - DA ELISA/DA ELISA plots.nb.html
- /Data processing and plotting/Figure 5A - DA genes/DA differentiation genes.Rmd
- /Data processing and plotting/Figure 5A - DA genes/Environment.RData
- /Data processing and plotting/Figure 5G - PI staining_Cell cycle plotting/Environment.RData
- /Data processing and plotting/Figure 5G - PI staining_Cell cycle plotting/PI staining.Rmd
- /Data processing and plotting/Figure 5G - PI staining_Cell cycle plotting/PI staining.nb.html
- /Data processing and plotting/Figure S3D - Seahorse/Environment.RData
- /Data processing and plotting/Figure S3D - Seahorse/Plots Seahorse.Rmd
- /Data processing and plotting/Figure S4D - PI signaling genes/Environment.RData
- /Data processing and plotting/Figure S4D - PI signaling genes/PI signaling genes.Rmd
- /Data processing and plotting/Figure S7C - OrganoidSize/Environment.RData
- /Data processing and plotting/Figure S7C - OrganoidSize/Plots_OrganoidSize.Rmd
- /Data processing and plotting/Image analysis data processing and plotting/Figure 5I - LaminB1 staining/Environment.RData
- /Data processing and plotting/Image analysis data processing and plotting/Figure 5I - LaminB1 staining/LMNB1 stainings.Rmd
- /Data processing and plotting/Image analysis data processing and plotting/Environment.RData
- /Data processing and plotting/Image analysis data processing and plotting/Stainings.Rmd
- /Data processing and plotting/Image analysis data processing and plotting/Stainings.nb.html
- /Data processing and plotting/WB data processing and plotting/Environment.RData
- /Data processing and plotting/WB data processing and plotting/WB data processing and plotting.Rmd
- /Data processing and plotting/WB data processing and plotting/WB data processing and plotting.nb.html
- /Data processing and plotting/Enrichment analysis Plotting/Environment.RData
- /Data processing and plotting/Enrichment analysis Plotting/Visualization of enrichment analysis .Rmd
- /Data processing and plotting/Figure 1B GCase activity/Environment.RData
- /Data processing and plotting/Figure 1B GCase activity/GCase.Rmd
- /Data processing and plotting/Figure 1B GCase activity/GCase.nb.html
- /Data processing and plotting/Figure 4A DA ELISA/.Rhistory
- /Data processing and plotting/Figure 4A DA ELISA/DA ELISA plots.Rmd
- /Data processing and plotting/Figure 4A DA ELISA/DA ELISA plots.nb.html
- /Data processing and plotting/Figure 4A DA ELISA/.RData
- /Data processing and plotting/Figure 5A DA genes/DA differentiation genes.Rmd
- /Data processing and plotting/Figure 5A DA genes/Environment.RData
- /Data processing and plotting/Figure 5G Propidium iodide staining_Cell cycle_Plotting/Environment.RData
- /Data processing and plotting/Figure 5G Propidium iodide staining_Cell cycle_Plotting/PI staining.Rmd
- /Data processing and plotting/Figure 5G Propidium iodide staining_Cell cycle_Plotting/PI staining.nb.html
- /Data processing and plotting/Figure 5I 9OHdG ELISA/DNA damage Plot.Rmd
- /Data processing and plotting/Figure 5I 9OHdG ELISA/DNA damage Plot.nb.html
- /Data processing and plotting/Figure S3D Seahorse/Environment.RData
- /Data processing and plotting/Figure S3D Seahorse/Plots Seahorse.Rmd
- /Data processing and plotting/Figure S4D PI signaling genes/PI signaling genes.Rmd
- /Data processing and plotting/Figure S4D PI signaling genes/Environment.RData
- /Data processing and plotting/Figure S7C OrganoidSize/Environment.RData
- /Data processing and plotting/Figure S7C OrganoidSize/Plots_OrganoidSize.Rmd
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Matthieu Gobin's avatar 763ba959
History
Name Last commit Last update
Data processing and plotting
Image analysis quantification
MEA analysis
Metabolic modelling
LICENSE
README.md
README.md

Contact info: jens.schwamborn@uni.lu or isabel.rosety@uni.lu

Please cite:

Complete dataset can be found here:

Data processing and plotting

  • Figure 1B - GCase activity
  • Figure 4A - DA ELISA
  • Figure 5A - DA genes
  • Figure 5G - Propidium iodide staining_Cell cycle_Plotting
  • Figure S3D - Seahorse
  • Figure S4D - PI signaling genes
  • Figure S7C - OrganoidSize
  • Figure 5I - LaminB1 staining