Commit bf4d06ce authored by Piotr Gawron's avatar Piotr Gawron
Browse files

upgrade to latest version of libsbgn

parent 572e14c0
......@@ -14,17 +14,9 @@
<id>central</id>
<url>http://repo.maven.apache.org/maven2/</url>
</repository>
<repository>
<id>repo</id>
<releases>
<enabled>true</enabled>
<checksumPolicy>ignore</checksumPolicy>
</releases>
<snapshots>
<enabled>false</enabled>
</snapshots>
<url>file://${project.basedir}/repo</url>
<id>jitpack.io</id>
<url>https://jitpack.io</url>
</repository>
</repositories>
......@@ -79,9 +71,9 @@
</dependency>
<dependency>
<groupId>org.sbgn</groupId>
<groupId>com.github.sbgn</groupId>
<artifactId>libsbgn</artifactId>
<version>${libsbgn.version}</version>
<version>milestone3.2</version>
</dependency>
<!-- Log4J2 -->
......
#NOTE: This is an Aether internal implementation file, its format can be changed without prior notice.
#Tue Aug 25 16:15:54 CEST 2015
libsbgn-0.2.jar>=
libsbgn-0.2.pom>=
<?xml version="1.0" encoding="UTF-8"?>
<project xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd" xmlns="http://maven.apache.org/POM/4.0.0"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
<modelVersion>4.0.0</modelVersion>
<groupId>org.sbgn</groupId>
<artifactId>libsbgn</artifactId>
<version>0.2</version>
<description>POM was created from install:install-file</description>
</project>
<?xml version="1.0" encoding="UTF-8"?>
<metadata>
<groupId>org.sbgn</groupId>
<artifactId>libsbgn</artifactId>
<versioning>
<release>0.2</release>
<versions>
<version>0.2</version>
</versions>
<lastUpdated>20150825141554</lastUpdated>
</versioning>
</metadata>
......@@ -132,7 +132,7 @@ public class SbgnmlXmlExporter {
map.getArc().addAll(getArcsFromReaction(reaction, map.getGlyph()));
}
sbgnData.setMap(map);
sbgnData.getMap().add(map);
return sbgnData;
}
......
......@@ -112,7 +112,7 @@ public class SbgnmlXmlParser {
}
// Extract map with all the glyphs and arcs
Map map = sbgnData.getMap();
Map map = sbgnData.getMap().get(0);
adjustSizeOfElements(map);
......
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