Commit d41983b9 authored by David Hoksza's avatar David Hoksza
Browse files

added parameters script file

parent 3ee7e4c1
#!/usr/bin/env bash #!/usr/bin/env bash
# ------------------------- PARAMETERS TO SET ------------------------- # ------------------------- PARAMETERS TO SET -------------------------
ORPHANET_IDS="791" source parameters.sh
#ORPHANET_IDS="130"
#ORPHANET_IDS="33,67046,79327,79321,86309"
DISGENET_CNT_THRESHOLD=50
DISGENET_ASSOCIATION_SCORE_THRESHOLD="0"
OPENTARGETS_CNT_THRESHOLD=50
OPENTARGETS_ASSOCIATION_SCORE_THRESHOLD="0.5"
BUILD_MAP_GENERATOR=0 #0 for building it
STOP_AFTER_STAGE=-1
# ------------------------- PARAMETERS TO SET ------------------------- # ------------------------- PARAMETERS TO SET -------------------------
ASSOCIATIONS_DIR=associations/ ASSOCIATIONS_DIR=associations/
......
ORPHANET_IDS="130"
#ORPHANET_IDS="851,404493,46348,85295"
#ORPHANET_IDS="33,67046,79327,79321,86309"
DISGENET_CNT_THRESHOLD=50
DISGENET_ASSOCIATION_SCORE_THRESHOLD="0"
OPENTARGETS_CNT_THRESHOLD=50
OPENTARGETS_ASSOCIATION_SCORE_THRESHOLD="0.3"
BUILD_MAP_GENERATOR=0 #1 for building it
STOP_AFTER_STAGE=-1
\ No newline at end of file
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