added parameters script file

assemble.sh

 #!/usr/bin/env bash
 
 # ------------------------- PARAMETERS TO SET -------------------------
-ORPHANET_IDS="791"
-#ORPHANET_IDS="130"
-#ORPHANET_IDS="33,67046,79327,79321,86309"
-
-DISGENET_CNT_THRESHOLD=50
-DISGENET_ASSOCIATION_SCORE_THRESHOLD="0"
-OPENTARGETS_CNT_THRESHOLD=50
-OPENTARGETS_ASSOCIATION_SCORE_THRESHOLD="0.5"
-BUILD_MAP_GENERATOR=0 #0 for building it
-STOP_AFTER_STAGE=-1
+source parameters.sh
 # ------------------------- PARAMETERS TO SET -------------------------
 
 ASSOCIATIONS_DIR=associations/

parameters.sh

+ORPHANET_IDS="130"
+#ORPHANET_IDS="851,404493,46348,85295"
+#ORPHANET_IDS="33,67046,79327,79321,86309"
+
+DISGENET_CNT_THRESHOLD=50
+DISGENET_ASSOCIATION_SCORE_THRESHOLD="0"
+OPENTARGETS_CNT_THRESHOLD=50
+OPENTARGETS_ASSOCIATION_SCORE_THRESHOLD="0.3"
+BUILD_MAP_GENERATOR=0 #1 for building it
+STOP_AFTER_STAGE=-1
\ No newline at end of file