1. 30 Jan, 2021 1 commit
  2. 26 Jan, 2021 14 commits
    • Marek Ostaszewski's avatar
      Merge branch 'repo_update' into 'master' · 1eccba28
      Marek Ostaszewski authored
      add drug targets and update various files:
      
      See merge request !268
      1eccba28
    • cylon-x's avatar
      Merge branch 'tmpBranch' into repo_update · f4ad0fab
      cylon-x authored
      f4ad0fab
    • cylon-x's avatar
    • cylon-x's avatar
      Update models · 9acab5da
      cylon-x authored
      9acab5da
    • Marek Ostaszewski's avatar
      0c51d734
    • Marek Ostaszewski's avatar
      Merge branch 'repo_update' into 'master' · eacdd016
      Marek Ostaszewski authored
      access functions updated, fixed
      
      See merge request !267
      eacdd016
    • cylon-x's avatar
      Update models · a9ec0c63
      cylon-x authored
      a9ec0c63
    • Marek Ostaszewski's avatar
      access functions updated, fixed · 80805a05
      Marek Ostaszewski authored
      80805a05
    • Marek Ostaszewski's avatar
      Merge branch 'repo_update' into 'master' · eec10c48
      Marek Ostaszewski authored
      access functions updated
      
      See merge request !266
      eec10c48
    • cylon-x's avatar
    • Marek Ostaszewski's avatar
      Merge branch 'master' into 'repo_update' · 0cdce10d
      Marek Ostaszewski authored
      # Conflicts:
      #   Executable Modules/SBML_qual_build/sif/Apoptosis_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Apoptosis_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Coagulation-pathway_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Coagulation-pathway_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/ER_Stress_stable.sif
      #   Executable Modules/SBML_qual_build/sif/ER_Stress_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/ETC_stable.sif
      #   Executable Modules/SBML_qual_build/sif/ETC_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/E_protein_stable.sif
      #   Executable Modules/SBML_qual_build/sif/E_protein_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/HMOX1_Pathway_stable.sif
      #   Executable Modules/SBML_qual_build/sif/HMOX1_Pathway_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/IFN-lambda_stable.sif
      #   Executable Modules/SBML_qual_build/sif/IFN-lambda_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Interferon1_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Interferon1_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/JNK_pathway_stable.sif
      #   Executable Modules/SBML_qual_build/sif/JNK_pathway_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Kynurenine_pathway_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Kynurenine_pathway_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Nsp4_Nsp6_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Nsp4_Nsp6_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Nsp9_protein_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Nsp9_protein_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Orf10_Cul2_pathway_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Orf10_Cul2_pathway_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Orf3a_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Orf3a_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/PAMP_signaling_stable.sif
      #   Executable Modules/SBML_qual_build/sif/PAMP_signaling_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Pyrimidine_deprivation_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Pyrimidine_deprivation_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/RTC-and-transcription_stable.sif
      #   Executable Modules/SBML_qual_build/sif/RTC-and-transcription_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Renin_angiotensin_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Renin_angiotensin_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/TGFB_pathway_stable.sif
      #   Executable Modules/SBML_qual_build/sif/TGFB_pathway_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Virus_replication_cycle_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Virus_replication_cycle_stable_raw.sif
      0cdce10d
    • cylon-x's avatar
      Update models · a329a00d
      cylon-x authored
      a329a00d
    • cylon-x's avatar
    • Marek Ostaszewski's avatar
      access functions updated · b69666e8
      Marek Ostaszewski authored
      b69666e8
  3. 25 Jan, 2021 11 commits
    • Marek Ostaszewski's avatar
      Merge branch 'repo_update' into 'master' · 121e6261
      Marek Ostaszewski authored
      formats in sbgn
      
      See merge request !265
      121e6261
    • Marek Ostaszewski's avatar
      Merge branch 'master' into 'repo_update' · 3fdfb358
      Marek Ostaszewski authored
      # Conflicts:
      #   Executable Modules/SBML_qual_build/sif/Apoptosis_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Apoptosis_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Coagulation-pathway_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Coagulation-pathway_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/ER_Stress_stable.sif
      #   Executable Modules/SBML_qual_build/sif/ER_Stress_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/ETC_stable.sif
      #   Executable Modules/SBML_qual_build/sif/ETC_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/E_protein_stable.sif
      #   Executable Modules/SBML_qual_build/sif/E_protein_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/HMOX1_Pathway_stable.sif
      #   Executable Modules/SBML_qual_build/sif/HMOX1_Pathway_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/IFN-lambda_stable.sif
      #   Executable Modules/SBML_qual_build/sif/IFN-lambda_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Interferon1_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Interferon1_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/JNK_pathway_stable.sif
      #   Executable Modules/SBML_qual_build/sif/JNK_pathway_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Kynurenine_pathway_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Kynurenine_pathway_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Nsp4_Nsp6_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Nsp4_Nsp6_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Nsp9_protein_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Nsp9_protein_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Orf10_Cul2_pathway_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Orf10_Cul2_pathway_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Orf3a_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Orf3a_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/PAMP_signaling_stable.sif
      #   Executable Modules/SBML_qual_build/sif/PAMP_signaling_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Pyrimidine_deprivation_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Pyrimidine_deprivation_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/RTC-and-transcription_stable.sif
      #   Executable Modules/SBML_qual_build/sif/RTC-and-transcription_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Renin_angiotensin_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Renin_angiotensin_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/TGFB_pathway_stable.sif
      #   Executable Modules/SBML_qual_build/sif/TGFB_pathway_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Virus_replication_cycle_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Virus_replication_cycle_stable_raw.sif
      3fdfb358
    • cylon-x's avatar
      Update models · 8966ff10
      cylon-x authored
      8966ff10
    • Marek Ostaszewski's avatar
      formats in sbgn · f0dd7bdf
      Marek Ostaszewski authored
      f0dd7bdf
    • Marek Ostaszewski's avatar
      Merge branch 'repo_update' into 'master' · ea544ac4
      Marek Ostaszewski authored
      smaller crosstalks
      
      See merge request !264
      ea544ac4
    • Marek Ostaszewski's avatar
      Merge branch 'master' into 'repo_update' · b3c04e51
      Marek Ostaszewski authored
      # Conflicts:
      #   Executable Modules/SBML_qual_build/sif/Apoptosis_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Apoptosis_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Coagulation-pathway_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Coagulation-pathway_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/ER_Stress_stable.sif
      #   Executable Modules/SBML_qual_build/sif/ER_Stress_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/ETC_stable.sif
      #   Executable Modules/SBML_qual_build/sif/ETC_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/E_protein_stable.sif
      #   Executable Modules/SBML_qual_build/sif/E_protein_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/HMOX1_Pathway_stable.sif
      #   Executable Modules/SBML_qual_build/sif/HMOX1_Pathway_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/IFN-lambda_stable.sif
      #   Executable Modules/SBML_qual_build/sif/IFN-lambda_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Interferon1_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Interferon1_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/JNK_pathway_stable.sif
      #   Executable Modules/SBML_qual_build/sif/JNK_pathway_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Kynurenine_pathway_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Kynurenine_pathway_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Nsp4_Nsp6_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Nsp4_Nsp6_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Nsp9_protein_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Nsp9_protein_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Orf10_Cul2_pathway_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Orf10_Cul2_pathway_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Orf3a_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Orf3a_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/PAMP_signaling_stable.sif
      #   Executable Modules/SBML_qual_build/sif/PAMP_signaling_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Pyrimidine_deprivation_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Pyrimidine_deprivation_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/RTC-and-transcription_stable.sif
      #   Executable Modules/SBML_qual_build/sif/RTC-and-transcription_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Renin_angiotensin_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Renin_angiotensin_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/TGFB_pathway_stable.sif
      #   Executable Modules/SBML_qual_build/sif/TGFB_pathway_stable_raw.sif
      #   Executable Modules/SBML_qual_build/sif/Virus_replication_cycle_stable.sif
      #   Executable Modules/SBML_qual_build/sif/Virus_replication_cycle_stable_raw.sif
      b3c04e51
    • cylon-x's avatar
      Update models · 5070811a
      cylon-x authored
      5070811a
    • Marek Ostaszewski's avatar
      smaller crosstalks · ebd8d89d
      Marek Ostaszewski authored
      ebd8d89d
    • Marek Ostaszewski's avatar
      Merge branch 'repo_update' into 'master' · 4a4d790c
      Marek Ostaszewski authored
      minerva utils
      
      See merge request !263
      4a4d790c
    • cylon-x's avatar
      Update models · 13467c79
      cylon-x authored
      13467c79
    • Marek Ostaszewski's avatar
      minerva utils · 8e84770c
      Marek Ostaszewski authored
      8e84770c
  4. 22 Jan, 2021 3 commits
  5. 19 Jan, 2021 2 commits
  6. 18 Jan, 2021 7 commits
  7. 15 Jan, 2021 1 commit
  8. 14 Jan, 2021 1 commit