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COVID-19
models
Commits
ea544ac4
Commit
ea544ac4
authored
Jan 25, 2021
by
Marek Ostaszewski
Browse files
Merge branch 'repo_update' into 'master'
smaller crosstalks See merge request
!264
parents
4a4d790c
b3c04e51
Changes
41
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Executable Modules/SBML_qual_build/sif/Apoptosis_stable.sif
View file @
ea544ac4
# Generated by CaSQ v0.9.
2
# Generated by CaSQ v0.9.
3
FAS/FASL_complex POSITIVE FADD
BAD/BBC3/BCL2L11_complex POSITIVE BAX
BCL2/MCL1/BCL2L1_complex POSITIVE BAD/BBC3/BCL2L11_complex
...
...
Executable Modules/SBML_qual_build/sif/Apoptosis_stable_raw.sif
View file @
ea544ac4
# Generated by CaSQ v0.9.
2
# Generated by CaSQ v0.9.
3
csa2 POSITIVE sa9
csa3 POSITIVE sa30
csa11 POSITIVE csa3
...
...
Executable Modules/SBML_qual_build/sif/Coagulation-pathway_stable.sif
View file @
ea544ac4
# Generated by CaSQ v0.9.
2
# Generated by CaSQ v0.9.
3
KNG1:KLKB1_complex POSITIVE Kininogen
KNG1:KLKB1_complex POSITIVE Kallikrein
KNG1:KLKB1_complex POSITIVE Bradykinin
...
...
Executable Modules/SBML_qual_build/sif/Coagulation-pathway_stable_raw.sif
View file @
ea544ac4
# Generated by CaSQ v0.9.
2
# Generated by CaSQ v0.9.
3
csa11 POSITIVE sa250
csa11 POSITIVE sa251
csa11 POSITIVE sa402
...
...
Executable Modules/SBML_qual_build/sif/ER_Stress_stable.sif
View file @
ea544ac4
# Generated by CaSQ v0.9.
2
# Generated by CaSQ v0.9.
3
EIF2-P:GDP_complex POSITIVE ATF4_rna
EIF2S1_phosphorylated POSITIVE EIF2-P:GDP_complex
EIF2S1_phosphorylated POSITIVE EIF2S1
...
...
Executable Modules/SBML_qual_build/sif/ER_Stress_stable_raw.sif
View file @
ea544ac4
# Generated by CaSQ v0.9.
2
# Generated by CaSQ v0.9.
3
path_0_csa33 POSITIVE path_0_sa106
path_0_sa87 POSITIVE path_0_csa33
path_0_sa87 POSITIVE path_0_sa90
...
...
Executable Modules/SBML_qual_build/sif/ETC_stable.sif
View file @
ea544ac4
# Generated by CaSQ v0.9.
2
# Generated by CaSQ v0.9.
3
Complex_1_complex POSITIVE Complex_1_complex
Complex_1_complex POSITIVE complex_2_complex_mitochondrial_matrix
Complex_1_complex POSITIVE complex_3_complex
...
...
Executable Modules/SBML_qual_build/sif/ETC_stable_raw.sif
View file @
ea544ac4
# Generated by CaSQ v0.9.
2
# Generated by CaSQ v0.9.
3
csa20 POSITIVE csa20
csa20 POSITIVE csa24
csa20 POSITIVE csa34
...
...
Executable Modules/SBML_qual_build/sif/E_protein_stable.sif
View file @
ea544ac4
# Generated by CaSQ v0.9.
2
# Generated by CaSQ v0.9.
3
histone_complex_Nucleus POSITIVE Chromatin_organization_phenotype
histone_complex_Nucleus POSITIVE histone_complex_Nucleus
BRD4 POSITIVE histone_complex_Nucleus
...
...
Executable Modules/SBML_qual_build/sif/E_protein_stable_raw.sif
View file @
ea544ac4
# Generated by CaSQ v0.9.
2
# Generated by CaSQ v0.9.
3
csa1 POSITIVE sa78
csa2 POSITIVE csa1
sa12 POSITIVE csa1
...
...
Executable Modules/SBML_qual_build/sif/HMOX1_Pathway_stable.sif
View file @
ea544ac4
# Generated by CaSQ v0.9.
2
# Generated by CaSQ v0.9.
3
Nrf2/Maf_complex POSITIVE HMOX1_rna
NRF2_phosphorylated_Nucleus POSITIVE Nrf2/Maf_complex
NRF2_phosphorylated_Nucleus POSITIVE SLC40A1_rna
...
...
Executable Modules/SBML_qual_build/sif/HMOX1_Pathway_stable_raw.sif
View file @
ea544ac4
# Generated by CaSQ v0.9.
2
# Generated by CaSQ v0.9.
3
csa2 POSITIVE sa50
sa43 POSITIVE csa2
sa43 POSITIVE sa140
...
...
Executable Modules/SBML_qual_build/sif/IFN-lambda_stable.sif
View file @
ea544ac4
# Generated by CaSQ v0.9.
2
# Generated by CaSQ v0.9.
3
receptor_complex_complex_cell POSITIVE receptor_complex_complex_cell
receptor_complex_complex_cell POSITIVE receptor_complex_complex_cell
receptor_complex_complex_cell POSITIVE ISGF3_precursor_complex
...
...
Executable Modules/SBML_qual_build/sif/IFN-lambda_stable_raw.sif
View file @
ea544ac4
# Generated by CaSQ v0.9.
2
# Generated by CaSQ v0.9.
3
csa10 POSITIVE csa9
csa10 POSITIVE csa11
csa10 POSITIVE csa12
...
...
Executable Modules/SBML_qual_build/sif/Interferon1_stable.sif
View file @
ea544ac4
# Generated by CaSQ v0.9.
2
# Generated by CaSQ v0.9.
3
IFNA1_IFNAR_complex POSITIVE JAK1_TYK2_complex
IFNAR_complex POSITIVE IFNA1_IFNAR_complex
IFNAR_complex POSITIVE IFNB1_IFNAR_complex
...
...
Executable Modules/SBML_qual_build/sif/Interferon1_stable_raw.sif
View file @
ea544ac4
# Generated by CaSQ v0.9.
2
# Generated by CaSQ v0.9.
3
csa2 POSITIVE csa9
csa1 POSITIVE csa2
csa1 POSITIVE csa3
...
...
Executable Modules/SBML_qual_build/sif/JNK_pathway_stable.sif
View file @
ea544ac4
# Generated by CaSQ v0.9.
2
# Generated by CaSQ v0.9.
3
JNK_complex_Cytoplasm POSITIVE AP-1_complex
JNK_complex_Cytoplasm POSITIVE BCL2_phosphorylated
JNK_complex_Cytoplasm POSITIVE ATF2_phosphorylated
...
...
Executable Modules/SBML_qual_build/sif/JNK_pathway_stable_raw.sif
View file @
ea544ac4
# Generated by CaSQ v0.9.
2
# Generated by CaSQ v0.9.
3
csa1 POSITIVE csa4
csa1 POSITIVE sa12
csa1 POSITIVE sa33
...
...
Executable Modules/SBML_qual_build/sif/Kynurenine_pathway_stable.sif
View file @
ea544ac4
# Generated by CaSQ v0.9.
2
# Generated by CaSQ v0.9.
3
AHR/L-KYN_complex POSITIVE Regulatory_T-cell_generation_phenotype
L-Kynurenine_simple_molecule POSITIVE AHR/L-KYN_complex
L-Kynurenine_simple_molecule POSITIVE H2O_simple_molecule_Cytosol
...
...
Executable Modules/SBML_qual_build/sif/Kynurenine_pathway_stable_raw.sif
View file @
ea544ac4
# Generated by CaSQ v0.9.
2
# Generated by CaSQ v0.9.
3
csa2 POSITIVE sa35
sa17 POSITIVE csa2
sa17 POSITIVE sa10
...
...
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