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Commit e74f9e5c authored by cylon-x's avatar cylon-x 🤖
Browse files

Update models

parent 2936610e
Pipeline #37893 passed with stage
in 2 minutes and 26 seconds
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......@@ -39,7 +39,7 @@
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......@@ -80,7 +80,7 @@
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......@@ -94,7 +94,7 @@
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......
......@@ -3,7 +3,7 @@ Complex_1_complex POSITIVE Complex_1_complex
Complex_1_complex POSITIVE complex_2_complex_mitochondrial_matrix
Complex_1_complex POSITIVE complex_3_complex
Complex_1_complex POSITIVE NAD+_simple_molecule
Complex_1_complex POSITIVE H+_ion_Intermembrane_space
Complex_1_complex POSITIVE H+_ion_mitochondrion
Complex_1_complex POSITIVE H+_ion_mitochondrial_matrix
Complex_1_complex POSITIVE QH_2__simple_molecule_mitochondrial_matrix
Complex_1_complex POSITIVE paraquat_simple_molecule
......@@ -34,7 +34,7 @@ Q_simple_molecule_mitochondrial_matrix POSITIVE complex_3_complex
Q_simple_molecule_mitochondrial_matrix POSITIVE QH_2__simple_molecule_mitochondrial_matrix
complex_3_complex POSITIVE complex_4_complex
complex_3_complex POSITIVE Q_simple_molecule_mitochondrial_matrix
complex_3_complex POSITIVE H+_ion_Intermembrane_space
complex_3_complex POSITIVE H+_ion_mitochondrion
complex_3_complex POSITIVE O^_2-_endsuper__simple_molecule
complex_3_complex POSITIVE Cyt_C_mitochondrial_matrix
mtDNA_encoded_OXPHOS_units_complex_mitochondrial_matrix POSITIVE complex_3_complex
......@@ -42,7 +42,7 @@ mtDNA_encoded_OXPHOS_units_complex_mitochondrial_matrix POSITIVE complex_4_compl
TCA_phenotype POSITIVE complex_2_complex_mitochondrial_matrix
ATP_Synthase_complex POSITIVE H+_ion_mitochondrial_matrix
ATP_Synthase_complex POSITIVE ATP_simple_molecule
H+_ion_Intermembrane_space POSITIVE ATP_Synthase_complex
H+_ion_mitochondrion POSITIVE ATP_Synthase_complex
ATP5MG POSITIVE ATP_Synthase_complex
Nsp6 NEGATIVE ATP_Synthase_complex
Cyt_C_mitochondrial_matrix POSITIVE complex_4_complex
......@@ -51,7 +51,7 @@ paraquat_simple_molecule POSITIVE paraquat_dication_complex
paraquat_simple_molecule POSITIVE superoxide_simple_molecule
O_2__simple_molecule POSITIVE paraquat_dication_complex
O_2__simple_molecule POSITIVE Q_simple_molecule_mitochondrial_matrix
O_2__simple_molecule POSITIVE H+_ion_Intermembrane_space
O_2__simple_molecule POSITIVE H+_ion_mitochondrion
O_2__simple_molecule POSITIVE O^_2-_endsuper__simple_molecule
O_2__simple_molecule POSITIVE Cyt_C_mitochondrial_matrix
O_2__simple_molecule POSITIVE superoxide_simple_molecule
......@@ -67,17 +67,17 @@ Nsp4 NEGATIVE TIM22_complex_complex
Nsp4 NEGATIVE TIM9-TIM10_complex_complex
TIM9-TIM10_complex_complex POSITIVE precursor_protein_N-terminus_binding
Cyt_C_mitochondrial_matrix POSITIVE Q_simple_molecule_mitochondrial_matrix
Cyt_C_mitochondrial_matrix POSITIVE H+_ion_Intermembrane_space
Cyt_C_mitochondrial_matrix POSITIVE H+_ion_mitochondrion
Cyt_C_mitochondrial_matrix POSITIVE O^_2-_endsuper__simple_molecule
Cyt_C_mitochondrial_matrix POSITIVE Cyt_C_mitochondrial_matrix
H+_ion_mitochondrial_matrix POSITIVE Q_simple_molecule_mitochondrial_matrix
H+_ion_mitochondrial_matrix POSITIVE H+_ion_Intermembrane_space
H+_ion_mitochondrial_matrix POSITIVE H+_ion_mitochondrion
H+_ion_mitochondrial_matrix POSITIVE O^_2-_endsuper__simple_molecule
H+_ion_mitochondrial_matrix POSITIVE ATP_simple_molecule
H+_ion_mitochondrial_matrix POSITIVE Cyt_C_mitochondrial_matrix
H+_ion_mitochondrial_matrix POSITIVE H_2_O_2__simple_molecule
QH_2__simple_molecule_mitochondrial_matrix POSITIVE Q_simple_molecule_mitochondrial_matrix
QH_2__simple_molecule_mitochondrial_matrix POSITIVE H+_ion_Intermembrane_space
QH_2__simple_molecule_mitochondrial_matrix POSITIVE H+_ion_mitochondrion
QH_2__simple_molecule_mitochondrial_matrix POSITIVE O^_2-_endsuper__simple_molecule
QH_2__simple_molecule_mitochondrial_matrix POSITIVE Cyt_C_mitochondrial_matrix
H_2_O_2__simple_molecule POSITIVE H+_ion_mitochondrial_matrix
......
# Generated by CaSQ v0.9.7
histone_complex_Nucleus POSITIVE Chromatin_organization_phenotype
histone_complex_Nucleus POSITIVE histone_complex_Nucleus
BRD4 POSITIVE histone_complex_Nucleus
histone_complex_nucleus POSITIVE Chromatin_organization_phenotype
histone_complex_nucleus POSITIVE histone_complex_nucleus
BRD4 POSITIVE histone_complex_nucleus
BRD4 POSITIVE P-TEFb_complex
BRD4 POSITIVE BRD4
BRD2 POSITIVE histone_complex_Nucleus
BRD2 POSITIVE histone_complex_nucleus
BRD2 POSITIVE TBP
BRD2 POSITIVE BRD2
H4C14 POSITIVE histone_complex_Nucleus
H4-16 POSITIVE histone_complex_Nucleus
H4C1 POSITIVE histone_complex_Nucleus
H3C15 POSITIVE histone_complex_Nucleus
H3C1 POSITIVE histone_complex_Nucleus
H4C9 POSITIVE histone_complex_Nucleus
H2BC21 POSITIVE histone_complex_Nucleus
H2A POSITIVE histone_complex_Nucleus
H4C14 POSITIVE histone_complex_nucleus
H4-16 POSITIVE histone_complex_nucleus
H4C1 POSITIVE histone_complex_nucleus
H3C15 POSITIVE histone_complex_nucleus
H3C1 POSITIVE histone_complex_nucleus
H4C9 POSITIVE histone_complex_nucleus
H2BC21 POSITIVE histone_complex_nucleus
H2A POSITIVE histone_complex_nucleus
CRB3:PALS1:PATJ_complex_complex POSITIVE Maintenance_of_tight_junction_phenotype
MPP5 POSITIVE CRB3:PALS1:PATJ_complex_complex
MPP5 POSITIVE E-PALS1_complex
......@@ -27,9 +27,9 @@ ASIC1_trimer:H+:STOML3_complex POSITIVE Activity_of_sodium_channels_phenotype
ASIC1 POSITIVE ASIC1_trimer:H+:STOML3_complex
STOML3 POSITIVE ASIC1_trimer:H+:STOML3_complex
STOML3 NEGATIVE Activity_of_sodium_channels_phenotype
E_Cytoplasm NEGATIVE ASIC1_trimer:H+:STOML3_complex
E_Cytoplasm NEGATIVE ATP1A:ATP1B:FXYDs_complex
E_Cytoplasm POSITIVE E-PALS1_complex
E_cell NEGATIVE ASIC1_trimer:H+:STOML3_complex
E_cell NEGATIVE ATP1A:ATP1B:FXYDs_complex
E_cell POSITIVE E-PALS1_complex
ATP1A:ATP1B:FXYDs_complex POSITIVE K+_ion
ATP1A:ATP1B:FXYDs_complex POSITIVE Na+_ion
ATP1A:ATP1B:FXYDs_complex POSITIVE Activity_of_sodium_channels_phenotype
......@@ -37,8 +37,8 @@ E-PALS1_complex POSITIVE Maintenance_of_tight_junction_phenotype
P-TEFb_complex POSITIVE RNA_Polymerase_II-dependent_Transcription__phenotype
CDK9 POSITIVE P-TEFb_complex
CCNT1 POSITIVE P-TEFb_complex
E_Nucleus NEGATIVE BRD4
E_Nucleus NEGATIVE BRD2
E_nucleus NEGATIVE BRD4
E_nucleus NEGATIVE BRD2
TBP POSITIVE TBP
JQ-1_simple_molecule NEGATIVE BRD2
H+_ion POSITIVE ASIC1
......@@ -21,23 +21,23 @@ Nsp1 POSITIVE inhibited_80S_ribosome_complex
80S_ribosome_complex POSITIVE inhibited_80S_ribosome_complex
80S_ribosome_complex POSITIVE IFNs_complex
80S_ribosome_complex POSITIVE antiviral_proteins_complex
RIG-I-MAVS_complex_mitochondria POSITIVE IRF3_phosphorylated
RIG-I:dsRNA_complex_mitochondria POSITIVE RIG-I-MAVS_complex_mitochondria
RIG-I:dsRNA_complex_mitochondria POSITIVE RIG-I:dsRNA_complex_mitochondria
MAVS POSITIVE RIG-I-MAVS_complex_mitochondria
RIG-I-MAVS_complex_mitochondrion POSITIVE IRF3_phosphorylated
RIG-I:dsRNA_complex_mitochondrion POSITIVE RIG-I-MAVS_complex_mitochondrion
RIG-I:dsRNA_complex_mitochondrion POSITIVE RIG-I:dsRNA_complex_mitochondrion
MAVS POSITIVE RIG-I-MAVS_complex_mitochondrion
STAT1_empty POSITIVE ISGF3_precursor_complex
STAT2_empty POSITIVE ISGF3_precursor_complex
RIG-I-MAVS_complex_peroxisome POSITIVE IRF1_phosphorylated
dsRNA_rna POSITIVE RIG-I-MAVS_complex_peroxisome
dsRNA_rna POSITIVE RIG-I:dsRNA_complex_mitochondria
dsRNA_rna POSITIVE RIG-I:dsRNA_complex_mitochondrion
dsRNA_rna POSITIVE dsRNA_vesicle_rna
ribosomal_60S_subunit_complex POSITIVE 80S_ribosome_complex
M POSITIVE RIG-1_M-Protein_complex
RIG-I POSITIVE RIG-1_M-Protein_complex
RIG-I POSITIVE RIG-I:dsRNA_complex_mitochondria
RIG-I:dsRNA_complex_mitochondria POSITIVE RIG-I:dsRNA_complex_mitochondria
PLPro POSITIVE RIG-I:dsRNA_complex_mitochondria
Riplet:TRIM25_complex POSITIVE RIG-I:dsRNA_complex_mitochondria
RIG-I POSITIVE RIG-I:dsRNA_complex_mitochondrion
RIG-I:dsRNA_complex_mitochondrion POSITIVE RIG-I:dsRNA_complex_mitochondrion
PLPro POSITIVE RIG-I:dsRNA_complex_mitochondrion
Riplet:TRIM25_complex POSITIVE RIG-I:dsRNA_complex_mitochondrion
ISGs_rna POSITIVE IFNs_complex
ISGs_rna POSITIVE antiviral_proteins_complex
SOCS1 POSITIVE receptor_complex_complex_cell
......
# Generated by CaSQ v0.9.7
JNK_complex_Cytoplasm POSITIVE AP-1_complex
JNK_complex_Cytoplasm POSITIVE BCL2_phosphorylated
JNK_complex_Cytoplasm POSITIVE ATF2_phosphorylated
JNK_complex_Cytoplasm POSITIVE TP53_phosphorylated
JNK_complex_Cytoplasm POSITIVE JNK_complex_Cytoplasm
MAP2K4_phosphorylated POSITIVE JNK_complex_Cytoplasm
MAP2K7_phosphorylated POSITIVE JNK_complex_Cytoplasm
7a POSITIVE JNK_complex_Cytoplasm
3a POSITIVE JNK_complex_Cytoplasm
S POSITIVE JNK_complex_Cytoplasm
JNK_complex_cell POSITIVE AP-1_complex
JNK_complex_cell POSITIVE BCL2_phosphorylated
JNK_complex_cell POSITIVE ATF2_phosphorylated
JNK_complex_cell POSITIVE TP53_phosphorylated
JNK_complex_cell POSITIVE JNK_complex_cell
MAP2K4_phosphorylated POSITIVE JNK_complex_cell
MAP2K7_phosphorylated POSITIVE JNK_complex_cell
7a POSITIVE JNK_complex_cell
3a POSITIVE JNK_complex_cell
S POSITIVE JNK_complex_cell
MLK1/2/3_complex POSITIVE MAP2K7_phosphorylated
SARS-CoV-1_proteins_complex POSITIVE MLK1/2/3_complex
SARS-CoV-1_proteins_complex POSITIVE MEKK1/4_complex
......
......@@ -30,7 +30,7 @@ sa102 POSITIVE sa157
sa102 POSITIVE sa171
sa102 POSITIVE sa172
sa102 POSITIVE sa195
sa102 POSITIVE sa197
sa102 NEGATIVE sa197
sa102 POSITIVE sa208
sa102 POSITIVE sa209
sa77 POSITIVE csa9
......@@ -68,26 +68,26 @@ sa39 POSITIVE sa194
sa47 POSITIVE sa24
sa48 POSITIVE sa24
sa120 POSITIVE sa24
sa25 POSITIVE sa56
sa25 POSITIVE sa171
sa25 NEGATIVE sa56
sa25 NEGATIVE sa171
sa79 POSITIVE sa25
sa70 POSITIVE sa25
sa51 POSITIVE sa25
sa51 POSITIVE sa49
sa51 POSITIVE sa102
sa27 POSITIVE sa56
sa27 POSITIVE sa61
sa27 POSITIVE sa157
sa27 POSITIVE sa171
sa27 POSITIVE sa172
sa27 NEGATIVE sa56
sa27 NEGATIVE sa61
sa27 NEGATIVE sa157
sa27 NEGATIVE sa171
sa27 NEGATIVE sa172
sa32 POSITIVE sa27
sa159 POSITIVE sa27
sa37 NEGATIVE sa28
sa37 POSITIVE sa30
sa37 NEGATIVE sa71
sa169 POSITIVE sa28
sa169 POSITIVE sa30
sa168 POSITIVE sa30
sa201 POSITIVE sa30
sa165 NEGATIVE sa30
sa165 POSITIVE sa95
sa54 POSITIVE sa30
......@@ -100,12 +100,12 @@ sa203 NEGATIVE sa30
sa134 POSITIVE sa34
sa132 POSITIVE sa40
sa49 POSITIVE sa50
sa50 POSITIVE sa56
sa50 POSITIVE sa61
sa50 NEGATIVE sa56
sa50 NEGATIVE sa61
sa94 POSITIVE sa50
sa156 POSITIVE sa56
sa156 POSITIVE sa61
sa156 POSITIVE sa190
sa156 NEGATIVE sa56
sa156 NEGATIVE sa61
sa156 NEGATIVE sa190
sa156 POSITIVE sa197
sa62 POSITIVE sa63
sa64 POSITIVE sa62
......
# Generated by CaSQ v0.9.7
SMAD1/5/8_complex POSITIVE Modulation_Cell_Cycle_phenotype
SMAD1/5/8_complex POSITIVE Modulation_of_cell_cycle_phenotype
BAMBI NEGATIVE SMAD1/5/8_complex
BAMBI NEGATIVE SMAD2/3_complex
BAMBI NEGATIVE TGFB/TGFBR_complex
......@@ -8,10 +8,10 @@ MAPK3 NEGATIVE SMAD1/5/8_complex
MAPK3 NEGATIVE SMAD2/3_complex
Orf3a POSITIVE SMAD1/5/8_complex
Orf3a POSITIVE SMAD2/3_complex
Nsp7b_Cell_Membrane POSITIVE SMAD1/5/8_complex
Nsp7b_cell POSITIVE SMAD1/5/8_complex
E POSITIVE SMAD1/5/8_complex
E3_ubiquitin_ligase_complex_complex NEGATIVE SMAD2/3_complex
SMAD2/3_complex POSITIVE Modulation_Cell_Cycle_phenotype
SMAD2/3_complex POSITIVE Modulation_of_cell_cycle_phenotype
TGFB/TGFBR_complex POSITIVE SMAD2/3_complex
TGFB/TGFBR_complex POSITIVE PP2A_complex
TGFB/TGFBR_complex POSITIVE RHOA
......
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