Commit 85e77931 authored by Marek Ostaszewski's avatar Marek Ostaszewski
Browse files

Merge branch 'casq' into 'master'

CaSQ version update

See merge request !229
parents bd26dd5c 30dace67
......@@ -8,6 +8,8 @@ NRF2_phosphorylated_Nucleus POSITIVE BLVRA_rna
NRF2_phosphorylated_Nucleus POSITIVE BLVRB_rna
MAF POSITIVE Nrf2/Maf_complex
MAF POSITIVE BACH1/Maf_complex
Bilirubin_simple_molecule POSITIVE ALB/BIL_complex
ABCC1 POSITIVE ALB/BIL_complex
BACH1/Maf_complex NEGATIVE HMOX1_rna
BACH1 POSITIVE BACH1/Maf_complex
Ubiquitin_Ligase_Complex_complex_Cytosol POSITIVE Ubiquitin_Ligase_Complex_complex_Cytosol
......@@ -22,21 +24,28 @@ Ubiquitin_Ligase_Complex_complex_Cytosol POSITIVE NRF2_ubiquitinated
Ferritin_complex POSITIVE Fe(3+)O(OH)_simple_molecule
FTH1_rna POSITIVE Ferritin_complex
FTL_rna POSITIVE Ferritin_complex
SLC40A1:CP:Cu2+_complex POSITIVE Fe2+_ion_default_compartment
SLC40A1:CP:Cu2+_complex POSITIVE Fe3+_ion_default_compartment
SLC40A1:CP:Cu2+_complex POSITIVE H2O_simple_molecule_default_compartment
SLC40A1_rna POSITIVE SLC40A1:CP:Cu2+_complex
BLVRA:Zn2+_complex POSITIVE Bilirubin_simple_molecule
BLVRA:Zn2+_complex POSITIVE NADP+_simple_molecule_Cytosol
BLVRA_rna POSITIVE BLVRA:Zn2+_complex
TFRC:holoTF_complex_Cytosol POSITIVE TFRC:holoTF_complex_Endosome_Lumen
TFRC POSITIVE TFRC:holoTF_complex_Cytosol
TFRC:TF_complex_Cytosol POSITIVE TFRC:holoTF_complex_Cytosol
TFRC:TF_complex_Cytosol POSITIVE Transferrin
Fe3+_ion_default_compartment POSITIVE TFRC:holoTF_complex_Cytosol
Fe3+_ion_default_compartment POSITIVE Fe2+_ion_default_compartment
Transferrin POSITIVE TFRC:holoTF_complex_Cytosol
TFRC:holoTF_complex_Endosome_Lumen POSITIVE TFRC:TF_complex_Endosome_Lumen
TFRC:holoTF_complex_Endosome_Lumen POSITIVE Fe3+_ion
TFRC:holoTF_complex_Endosome_Lumen POSITIVE Fe3+_ion_Endosome_Lumen
TFRC:TF_complex_Endosome_Lumen POSITIVE TFRC:TF_complex_Cytosol
TFRC:TF_complex_Cytosol POSITIVE TFRC
Heme_simple_molecule_Cytosol POSITIVE Biliverdin_simple_molecule
Heme_simple_molecule_Cytosol POSITIVE H2O_simple_molecule_Cytosol
Heme_simple_molecule_Cytosol POSITIVE NADP+_simple_molecule_Cytosol
Heme_simple_molecule_Cytosol POSITIVE Fe2+_ion_Cytosol
Heme_simple_molecule_Cytosol POSITIVE CO_simple_molecule
Heme_simple_molecule_Cytosol POSITIVE Heme_simple_molecule_default_compartment
Heme_simple_molecule_Cytosol POSITIVE ADP_simple_molecule
Heme_simple_molecule_Cytosol POSITIVE Pi_simple_molecule
Heme_simple_molecule_Mitochondrial_Matrix POSITIVE Heme_simple_molecule_Cytosol
......@@ -69,8 +78,10 @@ FECH POSITIVE Heme_simple_molecule_Mitochondrial_Matrix
FECH POSITIVE H+_ion_Mitochondrial_Matrix
Pb2+_ion NEGATIVE Heme_simple_molecule_Mitochondrial_Matrix
Pb2+_ion NEGATIVE H+_ion_Mitochondrial_Matrix
Fe2+_ion_Cytosol POSITIVE Fe2+_ion_default_compartment
Fe2+_ion_Cytosol POSITIVE Fe(3+)O(OH)_simple_molecule
Fe2+_ion_Cytosol POSITIVE Reactive_Oxygen_Species_simple_molecule
Fe2+_ion_default_compartment POSITIVE Fe2+_ion_Cytosol
SLC11A2 POSITIVE Fe2+_ion_Cytosol
Fe2+_ion_Cytosol POSITIVE Fe2+_ion_Cytosol
HMOX1_Cytosol POSITIVE HMOX1_Cytosol
......@@ -137,19 +148,39 @@ Lipid_Peroxide_simple_molecule POSITIVE Ferroptosis_phenotype
Lipid_Peroxide_simple_molecule POSITIVE Lipid_alcohol_simple_molecule
Poly-unsaturated_fatty_acid_simple_molecule POSITIVE Lipid_Peroxide_simple_molecule
Reactive_Oxygen_Species_simple_molecule POSITIVE Lipid_Peroxide_simple_molecule
Fe2+_ion_default_compartment POSITIVE Fe3+_ion_default_compartment
Fe2+_ion_default_compartment POSITIVE H2O_simple_molecule_default_compartment
Fe2+_ion_default_compartment POSITIVE H2O_simple_molecule_default_compartment
SLC40A1:HEPH:Cu2+_complex POSITIVE Fe2+_ion_default_compartment
SLC40A1:HEPH:Cu2+_complex POSITIVE Fe3+_ion_default_compartment
SLC40A1:HEPH:Cu2+_complex POSITIVE H2O_simple_molecule_default_compartment
O2_simple_molecule_default_compartment POSITIVE Fe3+_ion_default_compartment
O2_simple_molecule_default_compartment POSITIVE H2O_simple_molecule_default_compartment
H+_ion_default_compartment POSITIVE Fe3+_ion_default_compartment
H+_ion_default_compartment POSITIVE H2O_simple_molecule_default_compartment
H+_ion_default_compartment POSITIVE Fe3+_ion_default_compartment
H+_ion_default_compartment POSITIVE H2O_simple_molecule_default_compartment
O2_simple_molecule_default_compartment POSITIVE Fe3+_ion_default_compartment
O2_simple_molecule_default_compartment POSITIVE H2O_simple_molecule_default_compartment
O2_simple_molecule_Cytosol POSITIVE Fe(3+)O(OH)_simple_molecule
H+_ion_Cytosol POSITIVE Fe(3+)O(OH)_simple_molecule
e-_ion_default_compartment POSITIVE Fe2+_ion_default_compartment
CYBRD1:Heme_complex POSITIVE Fe2+_ion_default_compartment
GPX4 POSITIVE Lipid_alcohol_simple_molecule
Orf3a POSITIVE HMOX1_Cytosol
PKC POSITIVE NRF2_phosphorylated_Cytosol
FLVCR1-1 POSITIVE Heme_simple_molecule_default_compartment
H2O_simple_molecule_Cytosol POSITIVE Heme_simple_molecule_default_compartment
H2O_simple_molecule_Cytosol POSITIVE ADP_simple_molecule
H2O_simple_molecule_Cytosol POSITIVE Pi_simple_molecule
ATP_simple_molecule POSITIVE Heme_simple_molecule_default_compartment
ATP_simple_molecule POSITIVE ADP_simple_molecule
ATP_simple_molecule POSITIVE Pi_simple_molecule
ABCG2 POSITIVE Heme_simple_molecule_default_compartment
ABCG2 POSITIVE ADP_simple_molecule
ABCG2 POSITIVE Pi_simple_molecule
Fe3+_ion POSITIVE Fe2+_ion_Endosome_Lumen
Fe3+_ion_Endosome_Lumen POSITIVE Fe2+_ion_Endosome_Lumen
Fe2+_ion_Endosome_Lumen POSITIVE Fe2+_ion_Cytosol
e-_ion POSITIVE Fe2+_ion_Endosome_Lumen
e-_ion_Endosome_Lumen POSITIVE Fe2+_ion_Endosome_Lumen
STEAP3 POSITIVE Fe2+_ion_Endosome_Lumen
MCOLN1 POSITIVE Fe2+_ion_Cytosol
......@@ -8,6 +8,8 @@ sa43 POSITIVE sa150
sa43 POSITIVE sa151
sa5 POSITIVE csa2
sa5 POSITIVE csa4
sa32 POSITIVE csa3
sa39 POSITIVE csa3
csa4 NEGATIVE sa50
sa44 POSITIVE csa4
csa8 POSITIVE csa10
......@@ -22,21 +24,28 @@ csa10 POSITIVE sa249
csa11 POSITIVE sa152
sa144 POSITIVE csa11
sa145 POSITIVE csa11
csa12 POSITIVE sa135
csa12 POSITIVE sa138
csa12 POSITIVE sa158
sa140 POSITIVE csa12
csa21 POSITIVE sa32
csa21 POSITIVE sa34
sa150 POSITIVE csa21
csa27 POSITIVE csa29
sa217 POSITIVE csa27
csa31 POSITIVE csa27
csa31 POSITIVE sa214
sa138 POSITIVE csa27
sa138 POSITIVE sa162
sa214 POSITIVE csa27
csa29 POSITIVE csa30
csa29 POSITIVE sa229
csa30 POSITIVE csa31
csa31 POSITIVE sa217
sa21 POSITIVE sa22
sa21 POSITIVE sa26
sa21 POSITIVE sa27
sa21 POSITIVE sa28
sa21 POSITIVE sa31
sa21 POSITIVE sa197
sa21 POSITIVE sa204
sa21 POSITIVE sa205
sa23 POSITIVE sa21
......@@ -69,8 +78,10 @@ sa53 POSITIVE sa23
sa53 POSITIVE sa57
sa56 NEGATIVE sa23
sa56 NEGATIVE sa57
sa28 POSITIVE sa135
sa28 POSITIVE sa152
sa28 POSITIVE sa165
sa162 POSITIVE sa28
sa164 POSITIVE sa28
sa240 POSITIVE sa28
sa29 POSITIVE sa168
......@@ -137,15 +148,35 @@ sa130 POSITIVE sa127
sa130 POSITIVE sa166
sa128 POSITIVE sa130
sa165 POSITIVE sa130
sa135 POSITIVE sa138
sa135 POSITIVE sa158
sa135 POSITIVE sa211
csa22 POSITIVE sa135
csa22 POSITIVE sa138
csa22 POSITIVE sa211
sa156 POSITIVE sa138
sa156 POSITIVE sa158
sa157 POSITIVE sa138
sa157 POSITIVE sa158
sa212 POSITIVE sa138
sa212 POSITIVE sa211
sa213 POSITIVE sa138
sa213 POSITIVE sa211
sa136 POSITIVE sa152
sa137 POSITIVE sa152
sa195 POSITIVE sa162
csa13 POSITIVE sa162
sa167 POSITIVE sa166
sa169 POSITIVE sa168
sa190 POSITIVE sa3
sa196 POSITIVE sa197
sa206 POSITIVE sa197
sa206 POSITIVE sa204
sa206 POSITIVE sa205
sa203 POSITIVE sa197
sa203 POSITIVE sa204
sa203 POSITIVE sa205
sa198 POSITIVE sa197
sa198 POSITIVE sa204
sa198 POSITIVE sa205
sa229 POSITIVE sa238
......
......@@ -2,7 +2,9 @@ receptor_complex_complex_cell POSITIVE receptor_complex_complex_cell
receptor_complex_complex_cell POSITIVE receptor_complex_complex_cell
receptor_complex_complex_cell POSITIVE ISGF3_precursor_complex
receptor_complex_complex_cell POSITIVE receptor_complex_complex_cell
receptor_complex_complex_cell POSITIVE IFNL
receptor_complex_complex_cell POSITIVE receptor_complex_complex_cell
IFNL POSITIVE receptor_complex_complex_cell
ISGF3_complex POSITIVE ISGs_rna
ISGF3_precursor_complex POSITIVE ISGF3_complex
ISGF3_precursor_complex POSITIVE Inhibited_ISGF3_precursor?_complex
......@@ -16,8 +18,8 @@ ribosomal_40S_subunit_complex POSITIVE 80S_ribosome_complex
viral_nsp1 POSITIVE inhibited_ribosomal_40S_SU_complex
viral_nsp1 POSITIVE inhibited_80S_ribosome_complex
80S_ribosome_complex POSITIVE inhibited_80S_ribosome_complex
80S_ribosome_complex POSITIVE antiviral_proteins
80S_ribosome_complex POSITIVE IFNs
80S_ribosome_complex POSITIVE antiviral_proteins
RIG-I-MAVS_complex_mitochondria POSITIVE IRF3_phosphorylated
RIG-I_ubiquitinated POSITIVE RIG-I-MAVS_complex_mitochondria
RIG-I_ubiquitinated POSITIVE RIG-I_mitochondria
......@@ -31,8 +33,9 @@ SOCS1 POSITIVE receptor_complex_complex_cell
M-protein,_membrane-bound POSITIVE RIG-1_M-Protein_complex
RIG-I_mitochondria POSITIVE RIG-1_M-Protein_complex
RIG-I_mitochondria POSITIVE RIG-I_mitochondria
ISGs_rna POSITIVE antiviral_proteins
IFN-III POSITIVE IFNL
ISGs_rna POSITIVE IFNs
ISGs_rna POSITIVE antiviral_proteins
IFN-sensitive-response-element_gene POSITIVE ISGs_rna
viral_RNA+N-methyl-Guanine_rna POSITIVE 5'cap-viral-RNA_rna
viral_RNA_rna POSITIVE viral_RNA+N-methyl-Guanine_rna
......
......@@ -2,7 +2,9 @@ csa10 POSITIVE csa9
csa10 POSITIVE csa11
csa10 POSITIVE csa12
csa10 POSITIVE csa34
csa10 POSITIVE sa1
csa9 POSITIVE csa10
sa1 POSITIVE csa10
csa4 POSITIVE sa14
csa12 POSITIVE csa4
csa12 POSITIVE csa14
......@@ -16,8 +18,8 @@ csa24 POSITIVE csa27
sa70 POSITIVE csa15
sa70 POSITIVE csa16
csa27 POSITIVE csa16
csa27 POSITIVE sa12
csa27 POSITIVE sa13
csa27 POSITIVE sa2
csa27 POSITIVE sa3
csa17 POSITIVE sa126
sa145 POSITIVE csa17
sa145 POSITIVE sa83
......@@ -31,8 +33,9 @@ sa45 POSITIVE csa34
sa103 POSITIVE csa35
sa99 POSITIVE csa35
sa99 POSITIVE sa83
sa14 POSITIVE sa12
sa14 POSITIVE sa13
sa97 POSITIVE sa1
sa14 POSITIVE sa2
sa14 POSITIVE sa3
sa16 POSITIVE sa14
sa76 POSITIVE sa77
sa75 POSITIVE sa76
......
......@@ -15,6 +15,8 @@ sa4 POSITIVE csa2
csa15 POSITIVE csa93
sa14 POSITIVE csa15
sa14 POSITIVE sa230
csa2 POSITIVE csa5
csa2 POSITIVE csa4
sa13 POSITIVE csa12
csa42 POSITIVE csa43
csa14 POSITIVE csa13
......@@ -38,7 +40,6 @@ sa223 POSITIVE csa30
sa223 POSITIVE csa50
sa187 POSITIVE csa44
csa41 POSITIVE csa40
csa2 POSITIVE csa4
sa191 POSITIVE csa45
sa191 POSITIVE csa47
sa191 POSITIVE csa48
......@@ -48,6 +49,7 @@ sa193 POSITIVE csa48
sa200 POSITIVE csa49
sa188 POSITIVE csa50
sa8 POSITIVE csa2
sa8 POSITIVE sa154
sa8 POSITIVE sa225
sa3 POSITIVE sa4
sa3 POSITIVE sa220
......
......@@ -63,6 +63,7 @@ sa39 POSITIVE sa36
sa58 POSITIVE sa60
sa52 POSITIVE sa58
sa59 POSITIVE sa58
sa90 POSITIVE sa86
sa88 POSITIVE sa90
sa1 POSITIVE sa14
sa1 POSITIVE sa13
......@@ -91,6 +92,10 @@ sa2 POSITIVE sa15
sa16 POSITIVE sa3
sa16 POSITIVE sa15
sa34 POSITIVE sa36
sa87 POSITIVE sa175
sa87 POSITIVE sa176
sa87 POSITIVE sa178
sa91 POSITIVE sa87
sa62 POSITIVE sa142
sa141 POSITIVE sa142
sa143 NEGATIVE sa142
......@@ -106,6 +111,9 @@ sa29 POSITIVE sa28
sa29 POSITIVE sa23
sa32 POSITIVE sa30
sa89 POSITIVE sa91
sa86 POSITIVE sa175
sa86 POSITIVE sa176
sa86 POSITIVE sa178
sa48 POSITIVE sa53
sa56 POSITIVE sa53
sa51 POSITIVE sa48
......
......@@ -5,6 +5,35 @@ glyph2 POSITIVE glyph42
glyph2 POSITIVE glyph16
glyph3 POSITIVE glyph2
glyph3 POSITIVE glyph20
glyph5 POSITIVE glyph3
glyph51 POSITIVE glyph3
glyph8 POSITIVE glyph3
glyph13 POSITIVE glyph3
glyph13 POSITIVE glyph40
glyph13 POSITIVE glyph63
glyph49 POSITIVE glyph8
glyph50 POSITIVE glyph8
glyph33 POSITIVE glyph8
glyph54 POSITIVE glyph5
glyph61 POSITIVE glyph5
glyph62 POSITIVE glyph5
glyph63 POSITIVE glyph37
glyph63 POSITIVE glyph67
glyph63 POSITIVE glyph45
glyph63 POSITIVE glyph41
glyph63 POSITIVE glyph51
glyph63 POSITIVE glyph49
glyph63 POSITIVE glyph39
glyph63 POSITIVE glyph33
glyph63 POSITIVE glyph61
glyph63 POSITIVE glyph66
glyph63 POSITIVE glyph50
glyph63 POSITIVE glyph56
glyph40 POSITIVE glyph54
glyph40 POSITIVE glyph52
glyph40 POSITIVE glyph36
glyph40 POSITIVE glyph62
glyph40 POSITIVE glyph34
glyph17 POSITIVE glyph46
glyph17 POSITIVE glyph53
glyph20 POSITIVE glyph19
......
......@@ -2,8 +2,10 @@ csa430 POSITIVE csa357
sa1462 POSITIVE csa430
sa2040 POSITIVE csa430
sa2178 POSITIVE csa430
csa368 POSITIVE sa1539
csa368 POSITIVE sa2063
csa368 POSITIVE sa2238
csa368 POSITIVE sa2239
sa2009 POSITIVE csa368
sa1545 POSITIVE csa368
sa2173 POSITIVE csa368
......@@ -114,6 +116,18 @@ sa1524 POSITIVE sa1516
sa1524 POSITIVE sa2188
sa1525 POSITIVE sa1516
sa1525 POSITIVE sa2188
sa1921 POSITIVE sa1539
sa1921 POSITIVE sa2063
sa1921 POSITIVE sa2238
sa1921 POSITIVE sa2239
sa1537 POSITIVE sa1539
sa1537 POSITIVE sa2063
sa1537 POSITIVE sa2238
sa1537 POSITIVE sa2239
sa1544 NEGATIVE sa1539
sa1544 NEGATIVE sa2063
sa1544 NEGATIVE sa2238
sa1544 NEGATIVE sa2239
sa2063 POSITIVE sa1601
sa1675 POSITIVE sa1789
sa1675 POSITIVE sa1790
......@@ -165,10 +179,6 @@ sa2107 POSITIVE sa1879
sa2354 POSITIVE sa1962
sa2354 POSITIVE sa2355
sa2245 POSITIVE sa1986
sa1921 POSITIVE sa2063
sa1921 POSITIVE sa2238
sa1537 POSITIVE sa2063
sa1537 POSITIVE sa2238
sa2346 POSITIVE sa2105
sa2346 POSITIVE sa2296
sa2352 POSITIVE sa2106
......
current_version
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