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Commit 5fbd2c80 authored by cylon-x's avatar cylon-x 🤖
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Update models

parent d175914c
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......@@ -840,7 +840,7 @@ A SARS-CoV-2-Human Protein-Protein Interaction Map Reveals Drug Targets and Pote
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_sa38"><qual:listOfInputs><qual:input qual:qualitativeSpecies="sa101" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa38_in_0" /><qual:input qual:qualitativeSpecies="sa49" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa38_in_1" /><qual:input qual:qualitativeSpecies="sa52" qual:transitionEffect="none" qual:sign="negative" qual:id="tr_sa38_in_2" /><qual:input qual:qualitativeSpecies="sa70" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa38_in_3" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="sa38" qual:transitionEffect="assignmentLevel" qual:id="tr_sa38_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><or /><apply><eq /><ci>sa49</ci><cn type="integer">1</cn></apply><apply><eq /><ci>sa70</ci><cn type="integer">1</cn></apply></apply><apply><eq /><ci>sa101</ci><cn type="integer">1</cn></apply><apply><eq /><ci>sa52</ci><cn type="integer">0</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>TRAF6 PMID:20724660
TRIM 38 PMID: 22539786
TRIM 38 PMID: 22539786
TRIM 23 PMID: 20724660
</p>
</body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#re75">
......@@ -924,7 +924,7 @@ TRIM38 PMID:22539786
</rdf:Bag>
</bqmodel:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_sa101"><qual:listOfInputs><qual:input qual:qualitativeSpecies="csa8" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa101_in_0" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="sa101" qual:transitionEffect="assignmentLevel" qual:id="tr_sa101_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><eq /><ci>csa8</ci><cn type="integer">1</cn></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>TRIM59 inhibition
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_sa101"><qual:listOfInputs><qual:input qual:qualitativeSpecies="csa8" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa101_in_0" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="sa101" qual:transitionEffect="assignmentLevel" qual:id="tr_sa101_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><eq /><ci>csa8</ci><cn type="integer">1</cn></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>TRIM59 inhibition
PMID 22588174
</p>
</body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#re32">
......
......@@ -3,6 +3,7 @@ ACE2:SPIKE_complex_complex_EPITHELIAL_CELL POSITIVE Nucleocapsid_complex_SARS-Co
ACE2_EPITHELIAL_CELL POSITIVE ACE2:SPIKE_complex_complex_EPITHELIAL_CELL
S_SARS-CoV-2 POSITIVE ACE2:SPIKE_complex_complex_EPITHELIAL_CELL
S_SARS-CoV-2 POSITIVE ACE2:SPIKE_complex_complex_EPITHELIAL_CELL
Heparan_sulfate_simple_molecule_EPITHELIAL_CELL POSITIVE ACE2:SPIKE_complex_complex_EPITHELIAL_CELL
ACE2:SPIKE_complex_complex_EPITHELIAL_CELL POSITIVE S1_default_compartment
ACE2:SPIKE_complex_complex_EPITHELIAL_CELL POSITIVE S2_EPITHELIAL_CELL
ACE2:SPIKE_complex_complex_EPITHELIAL_CELL POSITIVE ACE2_EPITHELIAL_CELL
......@@ -10,6 +11,7 @@ ACE2:SPIKE_complex_complex_EPITHELIAL_CELL POSITIVE ACE2_default_compartment
S_SARS-CoV-2 POSITIVE ACE2:SPIKE_complex_complex_EPITHELIAL_CELL
ACE2_EPITHELIAL_CELL POSITIVE ACE2:SPIKE_complex_complex_EPITHELIAL_CELL
S_SARS-CoV-2 POSITIVE ACE2:SPIKE_complex_complex_EPITHELIAL_CELL
Heparan_sulfate_simple_molecule_EPITHELIAL_CELL POSITIVE ACE2:SPIKE_complex_complex_EPITHELIAL_CELL
Nucleocapsid_complex_EPITHELIAL_CELL POSITIVE (+)ss_gRNA_rna_EPITHELIAL_CELL
Nucleocapsid_complex_EPITHELIAL_CELL POSITIVE N_EPITHELIAL_CELL
Nucleocapsid_complex_SARS-CoV-2 POSITIVE Nucleocapsid_complex_EPITHELIAL_CELL
......@@ -32,6 +34,14 @@ S2_EPITHELIAL_CELL POSITIVE Nucleocapsid_complex_EPITHELIAL_CELL
S2_EPITHELIAL_CELL POSITIVE E_EPITHELIAL_CELL
S2_EPITHELIAL_CELL POSITIVE M_EPITHELIAL_CELL
S2_EPITHELIAL_CELL POSITIVE Orf7a_EPITHELIAL_CELL
cholesterol_simple_molecule POSITIVE Nucleocapsid_complex_EPITHELIAL_CELL
cholesterol_simple_molecule POSITIVE E_EPITHELIAL_CELL
cholesterol_simple_molecule POSITIVE M_EPITHELIAL_CELL
cholesterol_simple_molecule POSITIVE Orf7a_EPITHELIAL_CELL
S1:NRP1_complex_complex POSITIVE Nucleocapsid_complex_EPITHELIAL_CELL
S1:NRP1_complex_complex POSITIVE E_EPITHELIAL_CELL
S1:NRP1_complex_complex POSITIVE M_EPITHELIAL_CELL
S1:NRP1_complex_complex POSITIVE Orf7a_EPITHELIAL_CELL
Nucleocapsid_complex_SARS-CoV-2 POSITIVE Nucleocapsid_complex_EPITHELIAL_CELL
Nucleocapsid_complex_SARS-CoV-2 POSITIVE Orf7a_ENDOSOME
Nucleocapsid_complex_SARS-CoV-2 POSITIVE M_ENDOSOME
......@@ -111,6 +121,8 @@ Nsp2_EPITHELIAL_CELL POSITIVE Replication_transcription_complex_complex_DOUBLE-M
Nsp2_EPITHELIAL_CELL POSITIVE Replication_transcription_complex_complex_DOUBLE-MEMBRANE_VESICLE
Replication_transcription_complex_complex_DOUBLE-MEMBRANE_VESICLE POSITIVE Replication_transcription_complex_complex_DOUBLE-MEMBRANE_VESICLE
Endoplasmic_reticulum_complex POSITIVE Double-membrane_vesicle_complex
S1_default_compartment POSITIVE S1:NRP1_complex_complex
NRP1 POSITIVE S1:NRP1_complex_complex
ACE2:SPIKE_complex_complex_SARS-CoV-2 POSITIVE S1_ENDOSOME
ACE2:SPIKE_complex_complex_SARS-CoV-2 POSITIVE S2_SARS-CoV-2
CTSB POSITIVE S1_ENDOSOME
......
......@@ -3,6 +3,7 @@ csa430 POSITIVE csa357
sa1462 POSITIVE csa430
sa2040 POSITIVE csa430
sa2178 POSITIVE csa430
sa2369 POSITIVE csa430
csa368 POSITIVE sa1539
csa368 POSITIVE sa2063
csa368 POSITIVE sa2238
......@@ -10,6 +11,7 @@ csa368 POSITIVE sa2239
sa2009 POSITIVE csa368
sa1545 POSITIVE csa368
sa2173 POSITIVE csa368
sa2370 POSITIVE csa368
csa369 POSITIVE sa1675
csa369 POSITIVE sa1667
csa374 POSITIVE csa369
......@@ -32,6 +34,14 @@ sa1601 POSITIVE csa369
sa1601 POSITIVE sa2065
sa1601 POSITIVE sa2066
sa1601 POSITIVE sa2067
sa2372 POSITIVE csa369
sa2372 POSITIVE sa2065
sa2372 POSITIVE sa2066
sa2372 POSITIVE sa2067
csa441 POSITIVE csa369
csa441 POSITIVE sa2065
csa441 POSITIVE sa2066
csa441 POSITIVE sa2067
csa365 POSITIVE csa369
csa365 POSITIVE sa2114
csa365 POSITIVE sa2116
......@@ -111,6 +121,8 @@ sa2217 POSITIVE csa410
sa2357 POSITIVE csa410
csa440 POSITIVE csa410
csa439 POSITIVE csa438
sa1539 POSITIVE csa441
sa2371 POSITIVE csa441
csa431 POSITIVE sa1516
csa431 POSITIVE sa2188
sa1524 POSITIVE sa1516
......
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