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# COVID-19 models

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This repository is to share models and code for the analysis of COVID-19/SARS-CoV-2 mechanisms.

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- **Analysis** folder is dedicated to analytical workflows for the content of the map
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- **Curation** folder contains models curated in CellDesigner, Newt and SBGN-ED
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- **Executable models** folder contains Boolean models of COVID-19 curated diagrams generated with CaSQ
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- **Integration** folder contains the workflow for building a single map from multiple modules
- **Resources** folder contains scripts demonstrating integration of COVID-19 Disease Map diagrams with other bioinformatic resources  
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- **WikiPathways** folder contains a list of key COVID19 pathways on the [WikiPathways platform](https://wikipathways.org), 
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a dedicated collection [here](https://www.wikipathways.org/index.php/Portal:Disease/COVIDPathways).
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Also, the folder contains examples of conversion of WikiPathways GPML to CellDesigner
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See the [COVID-19 Disease Map project website](https://covid.pages.uni.lu/map_curation) for more information.