Skip to content

GitLab

Switch branch/tag
Find file Normal viewHistoryPermalink
RTC-and-transcription_stable.xml 163 KB
Newer Older
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1
2
3
4
5
6
7
8 
<?xml version="1.0" encoding="UTF-8"?>
<sbml xmlns="http://www.sbml.org/sbml/level2/version4" xmlns:celldesigner="http://www.sbml.org/2001/ns/celldesigner" level="2" version="4">
<model metaid="CDMT00001">
<notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
9 
<body>
Marek Ostaszewski's avatar
Author information    
Marek Ostaszewski committed
10
11
12
13
14 
Authors:
Falk Schreiber, Helena Borlinghaus, Universität Konstanz, Germany
Tobias Czauderna, Monash University, Australia
Description:
Assembly of the Replication Transcription Complex and Transcription of SARS-CoV-2
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
15
16
17
18
19
20 
</body>
</html>
</notes>
<annotation>
<celldesigner:extension>
<celldesigner:modelVersion>4.0</celldesigner:modelVersion>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
21 
<celldesigner:modelDisplay sizeX="2433" sizeY="1440"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
22 
<celldesigner:listOfIncludedSpecies>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
23 
<celldesigner:species id="s_id_glyph22" name="nsp8_space_(II)">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
24
25
26
27
28
29
30 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
31 
<rdf:Description rdf:about="#s_id_glyph22">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
32
33
34
35
36
37
38 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
39 
<celldesigner:complexSpecies>s_id_glyph9</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
40
41 
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
42
43
44
45 
<celldesigner:proteinReference>p_s_id_glyph22</celldesigner:proteinReference>
<celldesigner:state>
<celldesigner:homodimer>2</celldesigner:homodimer>
</celldesigner:state>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
46
47
48 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
49 
<celldesigner:species id="s_id_glyph24" name="nsp7">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
50
51
52
53
54
55
56 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
57 
<rdf:Description rdf:about="#s_id_glyph24">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
58
59
60
61
62
63
64 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
65 
<celldesigner:complexSpecies>s_id_glyph9</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
66
67 
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
68
69
70
71 
<celldesigner:proteinReference>p_s_id_glyph24</celldesigner:proteinReference>
<celldesigner:state>
<celldesigner:homodimer>2</celldesigner:homodimer>
</celldesigner:state>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
72
73
74 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
75 
<celldesigner:species id="s_id_glyph31" name="nsp8_space_(I)">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
76
77
78
79
80
81
82 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
83 
<rdf:Description rdf:about="#s_id_glyph31">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
84
85
86
87
88
89
90 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
91 
<celldesigner:complexSpecies>s_id_glyph9</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
92
93 
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
94
95
96
97 
<celldesigner:proteinReference>p_s_id_glyph31</celldesigner:proteinReference>
<celldesigner:state>
<celldesigner:homodimer>2</celldesigner:homodimer>
</celldesigner:state>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
98
99
100 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
101 
<celldesigner:species id="s_id_glyph21" name="nsp7">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
102
103
104
105
106
107
108 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
109 
<rdf:Description rdf:about="#s_id_glyph21">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
110
111
112
113
114
115
116 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
117 
<celldesigner:complexSpecies>s_id_glyph7</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
118
119 
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
120
121
122
123 
<celldesigner:proteinReference>p_s_id_glyph21</celldesigner:proteinReference>
<celldesigner:state>
<celldesigner:homodimer>2</celldesigner:homodimer>
</celldesigner:state>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
124
125
126 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
127 
<celldesigner:species id="s_id_glyph23" name="nsp8_space_(II)">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
128
129
130
131
132
133
134 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
135 
<rdf:Description rdf:about="#s_id_glyph23">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
136
137
138
139
140
141
142 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
143 
<celldesigner:complexSpecies>s_id_glyph7</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
144 
<celldesigner:speciesIdentity>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
145
146
147
148
149 
<celldesigner:class>PROTEIN</celldesigner:class>
<celldesigner:proteinReference>p_s_id_glyph23</celldesigner:proteinReference>
<celldesigner:state>
<celldesigner:homodimer>2</celldesigner:homodimer>
</celldesigner:state>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
150
151
152 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
153 
<celldesigner:species id="s_id_glyph25" name="nsp8_space_(I)">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
154
155
156
157
158
159
160 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
161 
<rdf:Description rdf:about="#s_id_glyph25">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
162
163
164
165
166
167
168 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
169 
<celldesigner:complexSpecies>s_id_glyph7</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
170 
<celldesigner:speciesIdentity>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
171
172
173
174
175 
<celldesigner:class>PROTEIN</celldesigner:class>
<celldesigner:proteinReference>p_s_id_glyph25</celldesigner:proteinReference>
<celldesigner:state>
<celldesigner:homodimer>2</celldesigner:homodimer>
</celldesigner:state>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
176
177
178 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
179 
<celldesigner:species id="s_id_glyph28" name="nsp7">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
180
181
182
183
184
185
186 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
187 
<rdf:Description rdf:about="#s_id_glyph28">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
188
189
190
191
192
193
194 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
195 
<celldesigner:complexSpecies>s_id_glyph8</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
196
197 
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
198 
<celldesigner:proteinReference>p_s_id_glyph28</celldesigner:proteinReference>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
199
200
201
202
203
204 
<celldesigner:state>
<celldesigner:homodimer>2</celldesigner:homodimer>
</celldesigner:state>
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
205 
<celldesigner:species id="s_id_glyph30" name="nsp8_space_(I)">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
206
207
208
209
210
211
212 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
213 
<rdf:Description rdf:about="#s_id_glyph30">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
214
215
216
217
218
219
220 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
221 
<celldesigner:complexSpecies>s_id_glyph8</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
222
223 
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
224 
<celldesigner:proteinReference>p_s_id_glyph30</celldesigner:proteinReference>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
225 
<celldesigner:state>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
226 
<celldesigner:homodimer>2</celldesigner:homodimer>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
227
228
229
230 
</celldesigner:state>
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
231 
<celldesigner:species id="s_id_glyph26" name="nsp8_space_(II)">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
232
233
234
235
236
237
238 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
239 
<rdf:Description rdf:about="#s_id_glyph26">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
240
241
242
243
244
245
246 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
247 
<celldesigner:complexSpecies>s_id_glyph8</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
248
249 
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
250 
<celldesigner:proteinReference>p_s_id_glyph26</celldesigner:proteinReference>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
251
252
253
254
255
256 
<celldesigner:state>
<celldesigner:homodimer>2</celldesigner:homodimer>
</celldesigner:state>
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
257 
<celldesigner:species id="s_id_glyph60" name="nsp10">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
258
259
260
261
262
263
264 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
265 
<rdf:Description rdf:about="#s_id_glyph60">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
266
267
268
269
270
271
272 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
273 
<celldesigner:complexSpecies>s_id_glyph5</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
274
275 
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
276 
<celldesigner:proteinReference>p_s_id_glyph60</celldesigner:proteinReference>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
277
278
279 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
280 
<celldesigner:species id="s_id_glyph57" name="nsp12">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
281
282
283
284
285
286
287 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
288 
<rdf:Description rdf:about="#s_id_glyph57">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
289
290
291
292
293
294
295 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411 
<celldesigner:complexSpecies>s_id_glyph5</celldesigner:complexSpecies>
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
<celldesigner:proteinReference>p_s_id_glyph57</celldesigner:proteinReference>
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
<celldesigner:species id="s_id_glyph38" name="nsp14">
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
<rdf:Description rdf:about="#s_id_glyph38">
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
<celldesigner:complexSpecies>s_id_glyph5</celldesigner:complexSpecies>
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
<celldesigner:proteinReference>p_s_id_glyph38</celldesigner:proteinReference>
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
<celldesigner:species id="s_id_glyph10" name="CoV_space_poly_minus__br_merase_space_complex">
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
<rdf:Description rdf:about="#s_id_glyph10">
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
<celldesigner:complexSpecies>s_id_glyph3</celldesigner:complexSpecies>
<celldesigner:speciesIdentity>
<celldesigner:class>COMPLEX</celldesigner:class>
<celldesigner:name>CoV_space_poly_minus__br_merase_space_complex</celldesigner:name>
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
<celldesigner:species id="s_id_glyph48" name="nsp9">
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
<rdf:Description rdf:about="#s_id_glyph48">
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
<celldesigner:complexSpecies>s_id_glyph3</celldesigner:complexSpecies>
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
<celldesigner:proteinReference>p_s_id_glyph48</celldesigner:proteinReference>
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
<celldesigner:species id="s_id_glyph7" name="complex">
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
<rdf:Description rdf:about="#s_id_glyph7">
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
<celldesigner:complexSpecies>s_id_glyph3</celldesigner:complexSpecies>
<celldesigner:speciesIdentity>
<celldesigner:class>COMPLEX</celldesigner:class>
<celldesigner:name>complex</celldesigner:name>
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
<celldesigner:species id="s_id_glyph15" name="(_plus_)gRNA_space_(including_space_ORF1a_space_ORF1b)">
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
<rdf:Description rdf:about="#s_id_glyph15">
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
<celldesigner:complexSpecies>s_id_glyph3</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
412
413 
<celldesigner:speciesIdentity>
<celldesigner:class>GENE</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
414 
<celldesigner:geneReference>g_s_id_glyph15</celldesigner:geneReference>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
415
416
417 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
418 
<celldesigner:species id="s_id_glyph43" name="nsp10">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
419
420
421
422
423
424
425 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
426 
<rdf:Description rdf:about="#s_id_glyph43">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
427
428
429
430
431
432
433 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
434 
<celldesigner:complexSpecies>s_id_glyph10</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
435
436 
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
437 
<celldesigner:proteinReference>p_s_id_glyph43</celldesigner:proteinReference>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
438
439
440 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
441 
<celldesigner:species id="s_id_glyph68" name="nsp12">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
442
443
444
445
446
447
448 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
449 
<rdf:Description rdf:about="#s_id_glyph68">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
450
451
452
453
454
455
456 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
457 
<celldesigner:complexSpecies>s_id_glyph10</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
458
459 
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
460 
<celldesigner:proteinReference>p_s_id_glyph68</celldesigner:proteinReference>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
461
462
463 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
464 
<celldesigner:species id="s_id_glyph35" name="nsp14">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
465
466
467
468
469
470
471 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
472 
<rdf:Description rdf:about="#s_id_glyph35">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
473
474
475
476
477
478
479 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
480 
<celldesigner:complexSpecies>s_id_glyph10</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
481
482 
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
483 
<celldesigner:proteinReference>p_s_id_glyph35</celldesigner:proteinReference>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
484
485
486 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
487 
<celldesigner:species id="s_id_glyph58" name="nsp10">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
488
489
490
491
492
493
494 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
495 
<rdf:Description rdf:about="#s_id_glyph58">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
496
497
498
499
500
501
502 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
503 
<celldesigner:complexSpecies>s_id_glyph4</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
504
505 
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
506 
<celldesigner:proteinReference>p_s_id_glyph58</celldesigner:proteinReference>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
507
508
509 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
510 
<celldesigner:species id="s_id_glyph65" name="nsp14">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
511
512
513
514
515
516
517 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
518 
<rdf:Description rdf:about="#s_id_glyph65">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
519
520
521
522
523
524
525 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
526 
<celldesigner:complexSpecies>s_id_glyph4</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
527
528 
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
529 
<celldesigner:proteinReference>p_s_id_glyph65</celldesigner:proteinReference>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
530
531
532 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
533 
<celldesigner:species id="s_id_glyph47" name="nsp12">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
534
535
536
537
538
539
540 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564 
<rdf:Description rdf:about="#s_id_glyph47">
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
<celldesigner:complexSpecies>s_id_glyph4</celldesigner:complexSpecies>
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
<celldesigner:proteinReference>p_s_id_glyph47</celldesigner:proteinReference>
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
<celldesigner:species id="s_id_glyph29" name="nsp8_space_(II)">
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
<rdf:Description rdf:about="#s_id_glyph29">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
565
566
567
568
569
570
571 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
572 
<celldesigner:complexSpecies>s_id_glyph6</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
573
574 
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
575 
<celldesigner:proteinReference>p_s_id_glyph29</celldesigner:proteinReference>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
576 
<celldesigner:state>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
577 
<celldesigner:homodimer>2</celldesigner:homodimer>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
578
579
580
581 
</celldesigner:state>
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
582 
<celldesigner:species id="s_id_glyph27" name="nsp7">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
583
584
585
586
587
588
589 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
590 
<rdf:Description rdf:about="#s_id_glyph27">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
591
592
593
594
595
596
597 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
598 
<celldesigner:complexSpecies>s_id_glyph6</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
599
600 
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
601
602
603
604 
<celldesigner:proteinReference>p_s_id_glyph27</celldesigner:proteinReference>
<celldesigner:state>
<celldesigner:homodimer>2</celldesigner:homodimer>
</celldesigner:state>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
605
606
607 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
608 
<celldesigner:species id="s_id_glyph32" name="nsp8_space_(I)">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
609
610
611
612
613
614
615 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
616 
<rdf:Description rdf:about="#s_id_glyph32">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
617
618
619
620
621
622
623 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
624 
<celldesigner:complexSpecies>s_id_glyph6</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
625
626 
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
627
628
629
630 
<celldesigner:proteinReference>p_s_id_glyph32</celldesigner:proteinReference>
<celldesigner:state>
<celldesigner:homodimer>2</celldesigner:homodimer>
</celldesigner:state>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
631
632
633 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
634 
<celldesigner:species id="s_id_glyph59" name="nsp10">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
635
636
637
638
639
640
641 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
642 
<rdf:Description rdf:about="#s_id_glyph59">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
643
644
645
646
647
648
649 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
650 
<celldesigner:complexSpecies>s_id_glyph11</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
651
652 
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
653 
<celldesigner:proteinReference>p_s_id_glyph59</celldesigner:proteinReference>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
654
655
656 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
657 
<celldesigner:species id="s_id_glyph55" name="nsp14">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
658
659
660
661
662
663
664 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
665 
<rdf:Description rdf:about="#s_id_glyph55">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
666
667
668
669
670
671
672 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
673 
<celldesigner:complexSpecies>s_id_glyph11</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
674
675 
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
676 
<celldesigner:proteinReference>p_s_id_glyph55</celldesigner:proteinReference>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
677
678
679 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
680 
<celldesigner:species id="s_id_glyph64" name="nsp12">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
681
682
683
684
685
686
687 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
688 
<rdf:Description rdf:about="#s_id_glyph64">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
689
690
691
692
693
694
695 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
696 
<celldesigner:complexSpecies>s_id_glyph11</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
697
698 
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
699 
<celldesigner:proteinReference>p_s_id_glyph64</celldesigner:proteinReference>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
700
701
702 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
703 
<celldesigner:species id="s_id_glyph44" name="nsp9">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
704
705
706
707
708
709
710 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
711 
<rdf:Description rdf:about="#s_id_glyph44">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
712
713
714
715
716
717
718 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
719 
<celldesigner:complexSpecies>s_id_glyph2</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
720
721 
<celldesigner:speciesIdentity>
<celldesigner:class>PROTEIN</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
722 
<celldesigner:proteinReference>p_s_id_glyph44</celldesigner:proteinReference>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
723
724
725 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
726 
<celldesigner:species id="s_id_glyph9" name="complex">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
727
728
729
730
731
732
733 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
734 
<rdf:Description rdf:about="#s_id_glyph9">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
735
736
737
738
739
740
741
742
743
744 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
<celldesigner:complexSpecies>s_id_glyph2</celldesigner:complexSpecies>
<celldesigner:speciesIdentity>
<celldesigner:class>COMPLEX</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
745 
<celldesigner:name>complex</celldesigner:name>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
746
747
748 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
749 
<celldesigner:species id="s_id_glyph11" name="CoV_space_poly_minus__br_merase_space_complex">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
750
751
752
753
754
755
756 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
757 
<rdf:Description rdf:about="#s_id_glyph11">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
758
759
760
761
762
763
764
765
766
767 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
<celldesigner:complexSpecies>s_id_glyph2</celldesigner:complexSpecies>
<celldesigner:speciesIdentity>
<celldesigner:class>COMPLEX</celldesigner:class>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
768 
<celldesigner:name>CoV_space_poly_minus__br_merase_space_complex</celldesigner:name>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
769
770
771 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
772 
<celldesigner:species id="s_id_glyph14" name="(_plus_)gRNA_space_(including_space_ORF1a_space_ORF1b)">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
773
774
775
776
777
778
779 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
780 
<rdf:Description rdf:about="#s_id_glyph14">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
781
782
783
784
785
786
787 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
788 
<celldesigner:complexSpecies>s_id_glyph2</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
789 
<celldesigner:speciesIdentity>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
790
791 
<celldesigner:class>GENE</celldesigner:class>
<celldesigner:geneReference>g_s_id_glyph14</celldesigner:geneReference>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
792
793
794 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
795 
<celldesigner:species id="s_id_glyph12" name="(_minus_)gRNA_space_(including_space_ORF1a_space_ORF1b)">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
796
797
798
799
800
801
802 
<celldesigner:notes>
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<title/>
</head>
<body>
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
803 
<rdf:Description rdf:about="#s_id_glyph12">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
804
805
806
807
808
809
810 
<dcterms:modified rdf:parseType="Resource"/>
</rdf:Description>
</rdf:RDF>
</body>
</html>
</celldesigner:notes>
<celldesigner:annotation>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
811 
<celldesigner:complexSpecies>s_id_glyph2</celldesigner:complexSpecies>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
812 
<celldesigner:speciesIdentity>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
813
814 
<celldesigner:class>GENE</celldesigner:class>
<celldesigner:geneReference>g_s_id_glyph12</celldesigner:geneReference>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
815
816
817
818 
</celldesigner:speciesIdentity>
</celldesigner:annotation>
</celldesigner:species>
</celldesigner:listOfIncludedSpecies>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
819
820
821
822
823
824
825
826
827
828 
<celldesigner:listOfCompartmentAliases>
<celldesigner:compartmentAlias id="glyph1" compartment="s_id_glyph1">
<celldesigner:class>SQUARE</celldesigner:class>
<celldesigner:bounds x="1085.0" y="355.0" w="1340.0" h="1070.0"/>
<celldesigner:namePoint x="1419.0" y="1399.0"/>
<celldesigner:doubleLine thickness="2.5" outerWidth="2.0" innerWidth="1.0"/>
<celldesigner:paint color="ff8080ff" scheme="Color"/>
<celldesigner:info state="empty" angle="-1.5707963267948966"/>
</celldesigner:compartmentAlias>
</celldesigner:listOfCompartmentAliases>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
829 
<celldesigner:listOfComplexSpeciesAliases>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
830 
<celldesigner:complexSpeciesAlias id="glyph2" species="s_id_glyph2" compartmentAlias="glyph1">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
831 
<celldesigner:activity>inactive</celldesigner:activity>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
832 
<celldesigner:bounds x="1115.0" y="920.0" w="440.0" h="450.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
833
834
835
836
837 
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:backupSize w="0.0" h="0.0"/>
<celldesigner:backupView state="none"/>
<celldesigner:usualView>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
838
839 
<celldesigner:innerPosition x="30.0" y="565.0"/>
<celldesigner:boxSize width="440.0" height="450.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
840
841
842
843
844 
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:usualView>
<celldesigner:briefView>
<celldesigner:innerPosition x="0.0" y="0.0"/>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
845
846 
<celldesigner:boxSize width="440.0" height="450.0"/>
<celldesigner:singleLine width="440.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
847
848
849
850 
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:briefView>
<celldesigner:info state="empty" angle="-1.5707963267948966"/>
</celldesigner:complexSpeciesAlias>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
851 
<celldesigner:complexSpeciesAlias id="glyph3" species="s_id_glyph3" compartmentAlias="glyph1">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
852 
<celldesigner:activity>inactive</celldesigner:activity>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
853 
<celldesigner:bounds x="1115.0" y="375.0" w="440.0" h="380.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
854
855
856
857
858 
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:backupSize w="0.0" h="0.0"/>
<celldesigner:backupView state="none"/>
<celldesigner:usualView>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
859
860 
<celldesigner:innerPosition x="30.0" y="20.0"/>
<celldesigner:boxSize width="440.0" height="380.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
861
862
863
864
865 
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:usualView>
<celldesigner:briefView>
<celldesigner:innerPosition x="0.0" y="0.0"/>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
866
867 
<celldesigner:boxSize width="440.0" height="380.0"/>
<celldesigner:singleLine width="440.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
868
869
870
871 
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:briefView>
<celldesigner:info state="empty" angle="-1.5707963267948966"/>
</celldesigner:complexSpeciesAlias>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
872 
<celldesigner:complexSpeciesAlias id="glyph8" species="s_id_glyph8">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
873 
<celldesigner:activity>inactive</celldesigner:activity>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
874 
<celldesigner:bounds x="685.0" y="650.0" w="140.0" h="240.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
875
876
877
878
879
880 
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:backupSize w="0.0" h="0.0"/>
<celldesigner:backupView state="none"/>
<celldesigner:usualView>
<celldesigner:innerPosition x="0.0" y="0.0"/>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
881 
<celldesigner:boxSize width="140.0" height="240.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
882
883
884
885
886 
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:usualView>
<celldesigner:briefView>
<celldesigner:innerPosition x="0.0" y="0.0"/>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
887 
<celldesigner:boxSize width="140.0" height="240.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
888
889
890
891
892 
<celldesigner:singleLine width="140.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:briefView>
<celldesigner:info state="empty" angle="-1.5707963267948966"/>
</celldesigner:complexSpeciesAlias>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
893 
<celldesigner:complexSpeciesAlias id="glyph5" species="s_id_glyph5">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
894 
<celldesigner:activity>inactive</celldesigner:activity>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
895 
<celldesigner:bounds x="685.0" y="365.0" w="140.0" h="260.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
896
897
898
899
900
901 
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:backupSize w="0.0" h="0.0"/>
<celldesigner:backupView state="none"/>
<celldesigner:usualView>
<celldesigner:innerPosition x="0.0" y="0.0"/>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
902 
<celldesigner:boxSize width="140.0" height="260.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
903
904
905
906
907 
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:usualView>
<celldesigner:briefView>
<celldesigner:innerPosition x="0.0" y="0.0"/>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
908
909 
<celldesigner:boxSize width="140.0" height="260.0"/>
<celldesigner:singleLine width="140.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
910
911
912
913 
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:briefView>
<celldesigner:info state="empty" angle="-1.5707963267948966"/>
</celldesigner:complexSpeciesAlias>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
914 
<celldesigner:complexSpeciesAlias id="glyph7" species="s_id_glyph7" complexSpeciesAlias="glyph3">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
915 
<celldesigner:activity>inactive</celldesigner:activity>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
916 
<celldesigner:bounds x="1135.0" y="470.0" w="140.0" h="240.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
917
918
919
920
921
922 
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:backupSize w="0.0" h="0.0"/>
<celldesigner:backupView state="none"/>
<celldesigner:usualView>
<celldesigner:innerPosition x="20.0" y="95.0"/>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
923 
<celldesigner:boxSize width="140.0" height="240.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
924
925
926
927
928 
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:usualView>
<celldesigner:briefView>
<celldesigner:innerPosition x="0.0" y="0.0"/>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
929 
<celldesigner:boxSize width="140.0" height="240.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
930
931
932
933
934 
<celldesigner:singleLine width="140.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:briefView>
<celldesigner:info state="empty" angle="-1.5707963267948966"/>
</celldesigner:complexSpeciesAlias>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
935 
<celldesigner:complexSpeciesAlias id="glyph10" species="s_id_glyph10" complexSpeciesAlias="glyph3">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
936 
<celldesigner:activity>inactive</celldesigner:activity>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
937 
<celldesigner:bounds x="1285.0" y="470.0" w="130.0" h="250.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
938
939
940
941
942 
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:backupSize w="0.0" h="0.0"/>
<celldesigner:backupView state="none"/>
<celldesigner:usualView>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
943
944 
<celldesigner:innerPosition x="170.0" y="95.0"/>
<celldesigner:boxSize width="130.0" height="250.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
945
946
947
948
949 
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:usualView>
<celldesigner:briefView>
<celldesigner:innerPosition x="0.0" y="0.0"/>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
950
951 
<celldesigner:boxSize width="130.0" height="250.0"/>
<celldesigner:singleLine width="130.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
952
953
954
955 
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:briefView>
<celldesigner:info state="empty" angle="-1.5707963267948966"/>
</celldesigner:complexSpeciesAlias>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
956 
<celldesigner:complexSpeciesAlias id="glyph4" species="s_id_glyph4" compartmentAlias="glyph1">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
957 
<celldesigner:activity>inactive</celldesigner:activity>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
958 
<celldesigner:bounds x="1835.0" y="865.0" w="140.0" h="260.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
959
960
961
962
963 
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:backupSize w="0.0" h="0.0"/>
<celldesigner:backupView state="none"/>
<celldesigner:usualView>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
964
965 
<celldesigner:innerPosition x="750.0" y="510.0"/>
<celldesigner:boxSize width="140.0" height="260.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
966
967
968
969
970 
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:usualView>
<celldesigner:briefView>
<celldesigner:innerPosition x="0.0" y="0.0"/>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
971
972 
<celldesigner:boxSize width="140.0" height="260.0"/>
<celldesigner:singleLine width="140.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
973
974
975
976 
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:briefView>
<celldesigner:info state="empty" angle="-1.5707963267948966"/>
</celldesigner:complexSpeciesAlias>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
977 
<celldesigner:complexSpeciesAlias id="glyph6" species="s_id_glyph6" compartmentAlias="glyph1">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
978 
<celldesigner:activity>inactive</celldesigner:activity>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
979 
<celldesigner:bounds x="1835.0" y="1145.0" w="140.0" h="240.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
980
981
982
983
984 
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:backupSize w="0.0" h="0.0"/>
<celldesigner:backupView state="none"/>
<celldesigner:usualView>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
985
986 
<celldesigner:innerPosition x="750.0" y="790.0"/>
<celldesigner:boxSize width="140.0" height="240.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
987
988
989
990
991 
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:usualView>
<celldesigner:briefView>
<celldesigner:innerPosition x="0.0" y="0.0"/>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
992
993
994
995
996
997
998
999
1000
1001
1002
1003
1004
1005
1006
1007
1008
1009
1010
1011
1012
1013 
<celldesigner:boxSize width="140.0" height="240.0"/>
<celldesigner:singleLine width="140.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:briefView>
<celldesigner:info state="empty" angle="-1.5707963267948966"/>
</celldesigner:complexSpeciesAlias>
<celldesigner:complexSpeciesAlias id="glyph11" species="s_id_glyph11" complexSpeciesAlias="glyph2">
<celldesigner:activity>inactive</celldesigner:activity>
<celldesigner:bounds x="1285.0" y="1090.0" w="130.0" h="250.0"/>
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:backupSize w="0.0" h="0.0"/>
<celldesigner:backupView state="none"/>
<celldesigner:usualView>
<celldesigner:innerPosition x="170.0" y="170.0"/>
<celldesigner:boxSize width="130.0" height="250.0"/>
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:usualView>
<celldesigner:briefView>
<celldesigner:innerPosition x="0.0" y="0.0"/>
<celldesigner:boxSize width="130.0" height="250.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1014
1015
1016
1017
1018 
<celldesigner:singleLine width="130.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:briefView>
<celldesigner:info state="empty" angle="-1.5707963267948966"/>
</celldesigner:complexSpeciesAlias>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1019
1020
1021
1022
1023
1024
1025
1026
1027
1028
1029
1030
1031
1032
1033
1034
1035
1036
1037
1038
1039 
<celldesigner:complexSpeciesAlias id="glyph9" species="s_id_glyph9" complexSpeciesAlias="glyph2">
<celldesigner:activity>inactive</celldesigner:activity>
<celldesigner:bounds x="1135.0" y="1090.0" w="140.0" h="240.0"/>
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:backupSize w="0.0" h="0.0"/>
<celldesigner:backupView state="none"/>
<celldesigner:usualView>
<celldesigner:innerPosition x="20.0" y="170.0"/>
<celldesigner:boxSize width="140.0" height="240.0"/>
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:usualView>
<celldesigner:briefView>
<celldesigner:innerPosition x="0.0" y="0.0"/>
<celldesigner:boxSize width="140.0" height="240.0"/>
<celldesigner:singleLine width="140.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:briefView>
<celldesigner:info state="empty" angle="-1.5707963267948966"/>
</celldesigner:complexSpeciesAlias>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1040
1041 
</celldesigner:listOfComplexSpeciesAliases>
<celldesigner:listOfSpeciesAliases>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1042 
<celldesigner:speciesAlias id="glyph37" species="s_id_glyph37">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1043 
<celldesigner:activity>inactive</celldesigner:activity>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1044 
<celldesigner:bounds x="361.0" y="950.0" w="108.0" h="60.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1045
1046
1047 
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:usualView>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1048 
<celldesigner:innerPosition x="361.0" y="950.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1049
1050 
<celldesigner:boxSize width="108.0" height="60.0"/>
<celldesigner:singleLine width="1.0"/>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1051 
<celldesigner:paint color="ffffcdcd" scheme="Color"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1052
1053 
</celldesigner:usualView>
<celldesigner:briefView>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1054 
<celldesigner:innerPosition x="361.0" y="950.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1055
1056
1057
1058
1059
1060 
<celldesigner:boxSize width="108.0" height="60.0"/>
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:briefView>
<celldesigner:info state="empty" angle="-1.5707963267948966"/>
</celldesigner:speciesAlias>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1061
1062
1063
1064
1065
1066
1067
1068
1069
1070
1071
1072
1073
1074
1075
1076
1077
1078
1079
1080 
<celldesigner:speciesAlias id="glyph25" species="s_id_glyph25" complexSpeciesAlias="glyph7">
<celldesigner:activity>inactive</celldesigner:activity>
<celldesigner:bounds x="1151.0" y="560.0" w="108.0" h="60.0"/>
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:usualView>
<celldesigner:innerPosition x="16.0" y="90.0"/>
<celldesigner:boxSize width="108.0" height="60.0"/>
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffcdcd" scheme="Color"/>
</celldesigner:usualView>
<celldesigner:briefView>
<celldesigner:innerPosition x="1156.0" y="560.0"/>
<celldesigner:boxSize width="108.0" height="60.0"/>
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:briefView>
<celldesigner:info state="open" prefix="free input" label="4" angle="-1.5707963267948966"/>
</celldesigner:speciesAlias>
<celldesigner:speciesAlias id="glyph64" species="s_id_glyph64" complexSpeciesAlias="glyph11">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1081 
<celldesigner:activity>inactive</celldesigner:activity>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1082 
<celldesigner:bounds x="1296.0" y="1170.0" w="108.0" h="60.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1083
1084
1085 
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:usualView>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1086 
<celldesigner:innerPosition x="11.0" y="80.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1087
1088 
<celldesigner:boxSize width="108.0" height="60.0"/>
<celldesigner:singleLine width="1.0"/>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1089 
<celldesigner:paint color="ffffcdcd" scheme="Color"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1090
1091 
</celldesigner:usualView>
<celldesigner:briefView>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1092 
<celldesigner:innerPosition x="1296.0" y="1170.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1093
1094
1095
1096
1097
1098 
<celldesigner:boxSize width="108.0" height="60.0"/>
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:briefView>
<celldesigner:info state="empty" angle="-1.5707963267948966"/>
</celldesigner:speciesAlias>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1099 
<celldesigner:speciesAlias id="glyph55" species="s_id_glyph55" complexSpeciesAlias="glyph11">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1100 
<celldesigner:activity>inactive</celldesigner:activity>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1101 
<celldesigner:bounds x="1296.0" y="1240.0" w="108.0" h="60.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1102
1103
1104 
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:usualView>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1105
1106
1107
1108
1109
1110
1111
1112 
<celldesigner:innerPosition x="11.0" y="150.0"/>
<celldesigner:boxSize width="108.0" height="60.0"/>
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffcdcd" scheme="Color"/>
</celldesigner:usualView>
<celldesigner:briefView>
<celldesigner:innerPosition x="1296.0" y="1240.0"/>
<celldesigner:boxSize width="108.0" height="60.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1113
1114 
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1115
1116
1117
1118
1119
1120
1121
1122
1123
1124
1125
1126
1127 
</celldesigner:briefView>
<celldesigner:info state="empty" angle="-1.5707963267948966"/>
</celldesigner:speciesAlias>
<celldesigner:speciesAlias id="glyph68" species="s_id_glyph68" complexSpeciesAlias="glyph10">
<celldesigner:activity>inactive</celldesigner:activity>
<celldesigner:bounds x="1296.0" y="550.0" w="108.0" h="60.0"/>
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:usualView>
<celldesigner:innerPosition x="11.0" y="80.0"/>
<celldesigner:boxSize width="108.0" height="60.0"/>
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffcdcd" scheme="Color"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1128
1129 
</celldesigner:usualView>
<celldesigner:briefView>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1130
1131 
<celldesigner:innerPosition x="1301.0" y="550.0"/>
<celldesigner:boxSize width="108.0" height="60.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1132
1133
1134
1135
1136 
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:briefView>
<celldesigner:info state="empty" angle="-1.5707963267948966"/>
</celldesigner:speciesAlias>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1137 
<celldesigner:speciesAlias id="glyph38" species="s_id_glyph38" complexSpeciesAlias="glyph5">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1138 
<celldesigner:activity>inactive</celldesigner:activity>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1139 
<celldesigner:bounds x="701.0" y="520.0" w="108.0" h="60.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1140
1141
1142 
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:usualView>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1143
1144 
<celldesigner:innerPosition x="16.0" y="155.0"/>
<celldesigner:boxSize width="108.0" height="60.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1145 
<celldesigner:singleLine width="1.0"/>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1146 
<celldesigner:paint color="ffffcdcd" scheme="Color"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1147
1148 
</celldesigner:usualView>
<celldesigner:briefView>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1149
1150 
<celldesigner:innerPosition x="701.0" y="520.0"/>
<celldesigner:boxSize width="108.0" height="60.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1151
1152
1153
1154
1155 
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:briefView>
<celldesigner:info state="empty" angle="-1.5707963267948966"/>
</celldesigner:speciesAlias>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1156
1157
1158
1159
1160
1161
1162
1163
1164
1165
1166
1167
1168
1169
1170
1171
1172
1173
1174
1175 
<celldesigner:speciesAlias id="glyph31" species="s_id_glyph31" complexSpeciesAlias="glyph9">
<celldesigner:activity>inactive</celldesigner:activity>
<celldesigner:bounds x="1151.0" y="1180.0" w="108.0" h="60.0"/>
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:usualView>
<celldesigner:innerPosition x="16.0" y="90.0"/>
<celldesigner:boxSize width="108.0" height="60.0"/>
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffcdcd" scheme="Color"/>
</celldesigner:usualView>
<celldesigner:briefView>
<celldesigner:innerPosition x="1151.0" y="1180.0"/>
<celldesigner:boxSize width="108.0" height="60.0"/>
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:briefView>
<celldesigner:info state="open" prefix="free input" label="4" angle="-1.5707963267948966"/>
</celldesigner:speciesAlias>
<celldesigner:speciesAlias id="glyph67" species="s_id_glyph67">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1176 
<celldesigner:activity>inactive</celldesigner:activity>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1177 
<celldesigner:bounds x="361.0" y="1035.0" w="108.0" h="60.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1178
1179
1180 
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:usualView>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1181 
<celldesigner:innerPosition x="361.0" y="1035.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1182
1183 
<celldesigner:boxSize width="108.0" height="60.0"/>
<celldesigner:singleLine width="1.0"/>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1184 
<celldesigner:paint color="ffffcdcd" scheme="Color"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1185
1186 
</celldesigner:usualView>
<celldesigner:briefView>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1187 
<celldesigner:innerPosition x="361.0" y="1035.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1188
1189
1190
1191
1192
1193 
<celldesigner:boxSize width="108.0" height="60.0"/>
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:briefView>
<celldesigner:info state="empty" angle="-1.5707963267948966"/>
</celldesigner:speciesAlias>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1194 
<celldesigner:speciesAlias id="glyph54" species="s_id_glyph54">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1195 
<celldesigner:activity>inactive</celldesigner:activity>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1196 
<celldesigner:bounds x="436.0" y="465.0" w="108.0" h="60.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1197
1198
1199 
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:usualView>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1200 
<celldesigner:innerPosition x="436.0" y="465.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1201
1202 
<celldesigner:boxSize width="108.0" height="60.0"/>
<celldesigner:singleLine width="1.0"/>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1203 
<celldesigner:paint color="ffffcdcd" scheme="Color"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1204
1205 
</celldesigner:usualView>
<celldesigner:briefView>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1206 
<celldesigner:innerPosition x="436.0" y="465.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1207
1208
1209
1210
1211
1212 
<celldesigner:boxSize width="108.0" height="60.0"/>
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:briefView>
<celldesigner:info state="empty" angle="-1.5707963267948966"/>
</celldesigner:speciesAlias>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1213 
<celldesigner:speciesAlias id="glyph58" species="s_id_glyph58" complexSpeciesAlias="glyph4">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1214 
<celldesigner:activity>inactive</celldesigner:activity>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1215 
<celldesigner:bounds x="1851.0" y="880.0" w="108.0" h="60.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1216
1217
1218 
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:usualView>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1219 
<celldesigner:innerPosition x="16.0" y="15.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1220
1221 
<celldesigner:boxSize width="108.0" height="60.0"/>
<celldesigner:singleLine width="1.0"/>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1222 
<celldesigner:paint color="ffffffff" scheme="Color"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1223
1224 
</celldesigner:usualView>
<celldesigner:briefView>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1225 
<celldesigner:innerPosition x="1851.0" y="880.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1226
1227
1228
1229
1230
1231 
<celldesigner:boxSize width="108.0" height="60.0"/>
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:briefView>
<celldesigner:info state="empty" angle="-1.5707963267948966"/>
</celldesigner:speciesAlias>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1232
1233
1234
1235
1236
1237
1238
1239
1240
1241
1242
1243
1244
1245
1246
1247
1248
1249
1250
1251 
<celldesigner:speciesAlias id="glyph27" species="s_id_glyph27" complexSpeciesAlias="glyph6">
<celldesigner:activity>inactive</celldesigner:activity>
<celldesigner:bounds x="1851.0" y="1160.0" w="108.0" h="60.0"/>
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:usualView>
<celldesigner:innerPosition x="16.0" y="15.0"/>
<celldesigner:boxSize width="108.0" height="60.0"/>
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffcdcd" scheme="Color"/>
</celldesigner:usualView>
<celldesigner:briefView>
<celldesigner:innerPosition x="1851.0" y="1160.0"/>
<celldesigner:boxSize width="108.0" height="60.0"/>
<celldesigner:singleLine width="1.0"/>
<celldesigner:paint color="ffffffff" scheme="Color"/>
</celldesigner:briefView>
<celldesigner:info state="open" prefix="free input" label="2" angle="-1.5707963267948966"/>
</celldesigner:speciesAlias>
<celldesigner:speciesAlias id="glyph45" species="s_id_glyph45">
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1252 
<celldesigner:activity>inactive</celldesigner:activity>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1253 
<celldesigner:bounds x="491.0" y="950.0" w="108.0" h="60.0"/>
Marek Ostaszewski's avatar
Reorganization and the coagulation pathway    
Marek Ostaszewski committed
1254
1255
1256 
<celldesigner:font size="12"/>
<celldesigner:view state="usual"/>
<celldesigner:usualView>
Marek Ostaszewski's avatar
Update RTC (CellDesigner)    
Marek Ostaszewski committed
1257
1258 
<celldesigner:innerPosition x="491.0" y="950.0"/>
<celldesigner:boxSize width="108.0" height="60.0"/>
Marek Ostaszewski's avatar