IFN-lambda_stable.sbml 67.5 KB
Newer Older
artenobot's avatar
artenobot committed
1
<?xml version='1.0' encoding='utf-8'?>
cylon-x's avatar
cylon-x committed
2 3 4 5 6 7 8 9 10 11
<sbml xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" level="3" version="1" layout:required="false" xmlns="http://www.sbml.org/sbml/level3/version1/core" qual:required="true" xmlns:layout="http://www.sbml.org/sbml/level3/version1/layout/version1" xmlns:qual="http://www.sbml.org/sbml/level3/version1/qual/version1"><model id="model_id"><listOfCompartments><compartment constant="true" id="comp1" /></listOfCompartments><layout:listOfLayouts><layout:layout id="layout1"><layout:dimensions width="2600" height="2700" /><layout:listOfAdditionalGraphicalObjects><layout:generalGlyph layout:reference="csa10" layout:id="csa10_glyph"><layout:boundingBox><layout:position layout:x="798.0" layout:y="1593.25" /><layout:dimensions layout:height="250.0" layout:width="220.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="csa4" layout:id="csa4_glyph"><layout:boundingBox><layout:position layout:x="951.0" layout:y="2408.25" /><layout:dimensions layout:height="120.0" layout:width="186.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="csa9" layout:id="csa9_glyph"><layout:boundingBox><layout:position layout:x="388.0" layout:y="1593.25" /><layout:dimensions layout:height="250.0" layout:width="220.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="csa11" layout:id="csa11_glyph"><layout:boundingBox><layout:position layout:x="1233.0" layout:y="1593.25" /><layout:dimensions layout:height="250.0" layout:width="220.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="csa14" layout:id="csa14_glyph"><layout:boundingBox><layout:position layout:x="685.0" layout:y="2203.25" /><layout:dimensions layout:height="122.0" layout:width="187.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="csa41" layout:id="csa41_glyph"><layout:boundingBox><layout:position layout:x="1416.5" layout:y="914.0" /><layout:dimensions layout:height="268.0" layout:width="201.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="csa15" layout:id="csa15_glyph"><layout:boundingBox><layout:position layout:x="1938.0" layout:y="2236.0" /><layout:dimensions layout:height="109.0" layout:width="166.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="csa16" layout:id="csa16_glyph"><layout:boundingBox><layout:position layout:x="1699.5" layout:y="2431.5" /><layout:dimensions layout:height="141.0" layout:width="267.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="csa17" layout:id="csa17_glyph"><layout:boundingBox><layout:position layout:x="1089.75" layout:y="284.0" /><layout:dimensions layout:height="200.0" layout:width="242.5" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="csa12" layout:id="csa12_glyph"><layout:boundingBox><layout:position layout:x="808.0" layout:y="2007.25" /><layout:dimensions layout:height="90.0" layout:width="210.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="csa21" layout:id="csa21_glyph"><layout:boundingBox><layout:position layout:x="1793.0" layout:y="410.0" /><layout:dimensions layout:height="160.0" layout:width="120.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="csa44" layout:id="csa44_glyph"><layout:boundingBox><layout:position layout:x="1647.5" layout:y="2178.5" /><layout:dimensions layout:height="100.0" layout:width="164.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="csa35" layout:id="csa35_glyph"><layout:boundingBox><layout:position layout:x="190.0" layout:y="407.0" /><layout:dimensions layout:height="130.0" layout:width="110.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="csa36" layout:id="csa36_glyph"><layout:boundingBox><layout:position layout:x="494.0" layout:y="269.0" /><layout:dimensions layout:height="120.0" layout:width="100.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="csa37" layout:id="csa37_glyph"><layout:boundingBox><layout:position layout:x="687.5" layout:y="240.0" /><layout:dimensions layout:height="120.0" layout:width="100.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="csa38" layout:id="csa38_glyph"><layout:boundingBox><layout:position layout:x="622.0" layout:y="93.0" /><layout:dimensions layout:height="120.0" layout:width="100.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="csa47" layout:id="csa47_glyph"><layout:boundingBox><layout:position layout:x="1890.25" layout:y="2139.0" /><layout:dimensions layout:height="30.0" layout:width="150.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="csa48" layout:id="csa48_glyph"><layout:boundingBox><layout:position layout:x="1889.75" layout:y="2178.0" /><layout:dimensions layout:height="30.0" layout:width="150.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="csa53" layout:id="csa53_glyph"><layout:boundingBox><layout:position layout:x="1976.0" layout:y="1644.0" /><layout:dimensions layout:height="60.0" layout:width="150.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="csa34" layout:id="csa34_glyph"><layout:boundingBox><layout:position layout:x="1491.0" layout:y="1593.125" /><layout:dimensions layout:height="250.0" layout:width="220.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="csa59" layout:id="csa59_glyph"><layout:boundingBox><layout:position layout:x="1807.0526315789475" layout:y="1645.5526315789475" /><layout:dimensions layout:height="60.0" layout:width="150.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="csa60" layout:id="csa60_glyph"><layout:boundingBox><layout:position layout:x="637.3947368421054" layout:y="1404.9473684210525" /><layout:dimensions layout:height="84.0" layout:width="129.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa4" layout:id="sa4_glyph"><layout:boundingBox><layout:position layout:x="658.0" layout:y="1892.25" /><layout:dimensions layout:height="40.0" layout:width="80.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa6" layout:id="sa6_glyph"><layout:boundingBox><layout:position layout:x="1083.0" layout:y="1892.25" /><layout:dimensions layout:height="40.0" layout:width="80.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa10" layout:id="sa10_glyph"><layout:boundingBox><layout:position layout:x="1063.0" layout:y="2088.0" /><layout:dimensions layout:height="40.0" layout:width="80.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa11" layout:id="sa11_glyph"><layout:boundingBox><layout:position layout:x="693.0" layout:y="2098.0" /><layout:dimensions layout:height="40.0" layout:width="80.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa14" layout:id="sa14_glyph"><layout:boundingBox><layout:position layout:x="1480.5" layout:y="2306.0" /><layout:dimensions layout:height="32.5" layout:width="105.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa16" layout:id="sa16_glyph"><layout:boundingBox><layout:position layout:x="1285.5" layout:y="2511.0" /><layout:dimensions layout:height="42.5" layout:width="195.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa45" layout:id="sa45_glyph"><layout:boundingBox><layout:position layout:x="1303.0" layout:y="1958.0" /><layout:dimensions layout:height="40.0" layout:width="80.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa46" layout:id="sa46_glyph"><layout:boundingBox><layout:position layout:x="1083.0" layout:y="1788.0" /><layout:dimensions layout:height="40.0" layout:width="80.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa70" layout:id="sa70_glyph"><layout:boundingBox><layout:position layout:x="1832.0" layout:y="2323.0" /><layout:dimensions layout:height="40.0" layout:width="80.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa75" layout:id="sa75_glyph"><layout:boundingBox><layout:position layout:x="1550.5" layout:y="204.5" /><layout:dimensions layout:height="25.0" layout:width="90.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa76" layout:id="sa76_glyph"><layout:boundingBox><layout:position layout:x="1553.5" layout:y="274.5" /><layout:dimensions layout:height="25.0" layout:width="90.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa77" layout:id="sa77_glyph"><layout:boundingBox><layout:position layout:x="1554.5" layout:y="340.5" /><layout:dimensions layout:height="25.0" layout:width="90.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa78" layout:id="sa78_glyph"><layout:boundingBox><layout:position layout:x="1680.5" layout:y="154.0" /><layout:dimensions layout:height="40.0" layout:width="80.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa80" layout:id="sa80_glyph"><layout:boundingBox><layout:position layout:x="1679.5" layout:y="231.0" /><layout:dimensions layout:height="40.0" layout:width="80.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa81" layout:id="sa81_glyph"><layout:boundingBox><layout:position layout:x="1679.5" layout:y="298.0" /><layout:dimensions layout:height="40.0" layout:width="80.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa82" layout:id="sa82_glyph"><layout:boundingBox><layout:position layout:x="408.0" layout:y="176.5" /><layout:dimensions layout:height="25.0" layout:width="90.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa92" layout:id="sa92_glyph"><layout:boundingBox><layout:position layout:x="1693.0" layout:y="1039.0" /><layout:dimensions layout:height="40.0" layout:width="80.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa96" layout:id="sa96_glyph"><layout:boundingBox><layout:position layout:x="965.0" layout:y="1226.5" /><layout:dimensions layout:height="25.0" layout:width="90.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa97" layout:id="sa97_glyph"><layout:boundingBox><layout:position layout:x="662.0" layout:y="1220.0" /><layout:dimensions layout:height="40.0" layout:width="80.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa99" layout:id="sa99_glyph"><layout:boundingBox><layout:position layout:x="347.0" layout:y="367.5" /><layout:dimensions layout:height="40.0" layout:width="90.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa100" layout:id="sa100_glyph"><layout:boundingBox><layout:position layout:x="722.0" layout:y="382.0" /><layout:dimensions layout:height="40.0" layout:width="80.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa101" layout:id="sa101_glyph"><layout:boundingBox><layout:position layout:x="524.0" layout:y="178.0" /><layout:dimensions layout:height="40.0" layout:width="80.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa103" layout:id="sa103_glyph"><layout:boundingBox><layout:position layout:x="203.0" layout:y="274.0" /><layout:dimensions layout:height="40.0" layout:width="80.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa125" layout:id="sa125_glyph"><layout:boundingBox><layout:position layout:x="248.0" layout:y="176.5" /><layout:dimensions layout:height="25.0" layout:width="90.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa126" layout:id="sa126_glyph"><layout:boundingBox><layout:position layout:x="1213.0" layout:y="809.0" /><layout:dimensions layout:height="40.0" layout:width="80.0" /></layout:boundingBox></layout:generalGlyph><layout:generalGlyph layout:reference="sa128" layout:id="sa128_glyph"><layout:boundingBox><layout:position layout:x="416.0" layout:y="86.5" /><layout:dimensions layout:height="25.0" layout:width="90.0" /></layout:boundingBox></layout:generalGlyph></layout:listOfAdditionalGraphicalObjects></layout:layout></layout:listOfLayouts><qual:listOfQualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="receptor complex_complex_cell" qual:constant="false" qual:id="csa10"><annotation><rdf:RDF><rdf:Description rdf:about="#s179"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:receptor complex_complex_cell&amp;Ifn lambda_complex" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s179" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="ISGF3_complex" qual:constant="false" qual:id="csa4"><annotation><rdf:RDF><rdf:Description rdf:about="#s194"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:ISGF3 precursor_complex&amp;IRF9" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s194" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="receptor complex_complex_cell" qual:constant="false" qual:id="csa9"><annotation><rdf:RDF><rdf:Description rdf:about="#s29"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:receptor complex_complex_cell" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s29" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="receptor complex_complex_cell" qual:constant="false" qual:id="csa11"><annotation><rdf:RDF><rdf:Description rdf:about="#s207"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:receptor complex_complex_cell&amp;SOCS3" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s207" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="Inhibited ISGF3 precursor_complex" qual:constant="false" qual:id="csa14"><annotation><rdf:RDF><rdf:Description rdf:about="#s270"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:ISGF3 precursor_complex&amp;STAT3" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s270" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="p38-NFkB_complex" qual:constant="false" qual:id="csa41"><annotation><rdf:RDF>
<rdf:Description rdf:about="#s169">
<bqmodel:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:uniprot:Q14653" />
</rdf:Bag>
</bqmodel:is>
<bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:IRF3_phosphorylated" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s260" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description>
</rdf:RDF>
</annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="inhibited ribosomal 40S SU_complex" qual:constant="false" qual:id="csa15"><annotation><rdf:RDF>
artenobot's avatar
artenobot committed
12 13 14 15 16 17
<rdf:Description rdf:about="#s81">
<bqbiol:occursIn>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:doi:10.1101%2F2020.05.18.102467" />
</rdf:Bag>
</bqbiol:occursIn>
cylon-x's avatar
cylon-x committed
18
<bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:ribosomal 40S subunit_complex&amp;Nsp1" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s81" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description>
artenobot's avatar
artenobot committed
19
</rdf:RDF>
cylon-x's avatar
cylon-x committed
20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145
</annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="inhibited 80S ribosome_complex" qual:constant="false" qual:id="csa16"><annotation><rdf:RDF><rdf:Description rdf:about="#s83"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:80S ribosome_complex&amp;Nsp1" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s83" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="RIG-I-MAVS_complex_mitochondria" qual:constant="false" qual:id="csa17"><annotation><rdf:RDF>
<rdf:Description rdf:about="#s22">
<bqmodel:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:uniprot:O14920" />
</rdf:Bag>
</bqmodel:is>
<bqmodel:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:uniprot:O15111" />
</rdf:Bag>
</bqmodel:is>
<bqmodel:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:uniprot:Q9UHD2" />
</rdf:Bag>
</bqmodel:is>
<bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:RIG-I:dsRNA_complex_mitochondria&amp;MAVS" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s31" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description>
</rdf:RDF>
</annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="ISGF3 precursor_complex" qual:constant="false" qual:id="csa12"><annotation><rdf:RDF><rdf:Description rdf:about="#s56"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:STAT1_empty&amp;receptor complex_complex_cell|STAT2_empty&amp;receptor complex_complex_cell" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s56" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="RIG-I-MAVS_complex_peroxisome" qual:constant="false" qual:id="csa21"><annotation><rdf:RDF><rdf:Description rdf:about="#s116"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:dsRNA_rna" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s116" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="80S ribosome_complex" qual:constant="false" qual:id="csa44"><annotation><rdf:RDF><rdf:Description rdf:about="#s200"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:ribosomal 60S subunit_complex&amp;ribosomal 40S subunit_complex" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s200" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="RIG-1 M-Protein_complex" qual:constant="false" qual:id="csa35"><annotation><rdf:RDF><rdf:Description rdf:about="#s235"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:M&amp;RIG-I" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s235" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="RIG-I:dsRNA_complex_mitochondria" qual:constant="false" qual:id="csa36"><annotation><rdf:RDF><rdf:Description rdf:about="#s242"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:RIG-I&amp;dsRNA_rna|RIG-I:dsRNA_complex_mitochondria&amp;PLPro" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s242" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="RIG-I:dsRNA_complex_mitochondria" qual:constant="false" qual:id="csa37"><annotation><rdf:RDF><rdf:Description rdf:about="#s244"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:RIG-I:dsRNA_complex_mitochondria&amp;Riplet:TRIM25_complex" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s244" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="Riplet:TRIM25_complex" qual:constant="true" qual:id="csa38"><annotation><rdf:RDF><rdf:Description rdf:about="#s248"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:Riplet:TRIM25_complex" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s248" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="ribosomal 60S subunit_complex" qual:constant="true" qual:id="csa47"><annotation><rdf:RDF><rdf:Description rdf:about="#s199"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:ribosomal 60S subunit_complex" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s199" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="ribosomal 40S subunit_complex" qual:constant="true" qual:id="csa48"><annotation><rdf:RDF><rdf:Description rdf:about="#s198"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:ribosomal 40S subunit_complex" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s198" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="IFNs_complex" qual:constant="false" qual:id="csa53"><annotation><rdf:RDF><rdf:Description rdf:about="#s298"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:ISGs_rna&amp;80S ribosome_complex" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s298" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="receptor complex_complex_cell" qual:constant="false" qual:id="csa34"><annotation><rdf:RDF><rdf:Description rdf:about="#s219"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:receptor complex_complex_cell&amp;SOCS1" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s219" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="antiviral proteins_complex" qual:constant="false" qual:id="csa59"><annotation><rdf:RDF><rdf:Description rdf:about="#s342"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:ISGs_rna&amp;80S ribosome_complex" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s342" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="Ifn lambda_complex" qual:constant="false" qual:id="csa60"><annotation><rdf:RDF><rdf:Description rdf:about="#s352"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:IFN-III|receptor complex_complex_cell" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s352" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="STAT1_empty" qual:constant="true" qual:id="sa4"><annotation><rdf:RDF><rdf:Description rdf:about="#s12"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:STAT1_empty" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s12" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="STAT2_empty" qual:constant="true" qual:id="sa6"><annotation><rdf:RDF><rdf:Description rdf:about="#s25"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:STAT2_empty" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s25" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="IRF9" qual:constant="true" qual:id="sa10"><annotation><rdf:RDF><rdf:Description rdf:about="#s23"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:IRF9" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s23" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="STAT3" qual:constant="true" qual:id="sa11"><annotation><rdf:RDF><rdf:Description rdf:about="#s69"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:STAT3" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s69" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="ISGs_rna" qual:constant="false" qual:id="sa14"><annotation><rdf:RDF><rdf:Description rdf:about="#s8"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:IFN-sensitive-response-element_gene&amp;ISGF3_complex" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s8" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="IFN-sensitive-response-element_gene" qual:constant="true" qual:id="sa16"><annotation><rdf:RDF><rdf:Description rdf:about="#s14"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:IFN-sensitive-response-element_gene" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s14" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="SOCS1" qual:constant="true" qual:id="sa45"><annotation><rdf:RDF><rdf:Description rdf:about="#s46"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:SOCS1" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s46" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="SOCS3" qual:constant="true" qual:id="sa46"><annotation><rdf:RDF><rdf:Description rdf:about="#s47"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:SOCS3" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s47" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="Nsp1" qual:constant="true" qual:id="sa70"><annotation><rdf:RDF>
<rdf:Description rdf:about="#s82">
<bqmodel:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:ncbiprotein:YP_009725297" />
</rdf:Bag>
</bqmodel:is>
<bqmodel:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:uniprot:P0C6X7" />
</rdf:Bag>
</bqmodel:is>
<bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:Nsp1" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s82" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description>
</rdf:RDF>
</annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="viral RNA_rna" qual:constant="true" qual:id="sa75"><annotation><rdf:RDF><rdf:Description rdf:about="#s93"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:viral RNA_rna" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s93" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="viral RNA+N-methyl-Guanine_rna" qual:constant="false" qual:id="sa76"><annotation><rdf:RDF><rdf:Description rdf:about="#s94"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:viral RNA_rna&amp;nsp14" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s94" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="5'cap-viral-RNA_rna" qual:constant="false" qual:id="sa77"><annotation><rdf:RDF><rdf:Description rdf:about="#s95"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:viral RNA+N-methyl-Guanine_rna&amp;nsp16" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s95" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="IFIH1" qual:constant="true" qual:id="sa78"><annotation><rdf:RDF><rdf:Description rdf:about="#s96"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:IFIH1" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s96" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="nsp14" qual:constant="true" qual:id="sa80"><annotation><rdf:RDF>
<rdf:Description rdf:about="#s98">
<bqmodel:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:ncbiprotein:YP_009725309" />
</rdf:Bag>
</bqmodel:is>
<bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:nsp14" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s98" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description>
</rdf:RDF>
</annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="nsp16" qual:constant="true" qual:id="sa81"><annotation><rdf:RDF>
<rdf:Description rdf:about="#s99">
<bqmodel:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:ncbiprotein:YP_009725311" />
</rdf:Bag>
</bqmodel:is>
<bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:nsp16" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s99" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description>
</rdf:RDF>
</annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="dsRNA_rna" qual:constant="false" qual:id="sa82"><annotation><rdf:RDF><rdf:Description rdf:about="#s140"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:dsRNA_vesicle_rna|RNA_rna" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s140" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="IRF1_phosphorylated" qual:constant="false" qual:id="sa92"><annotation><rdf:RDF><rdf:Description rdf:about="#s166"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:RIG-I-MAVS_complex_peroxisome" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s166" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="IFN-III_rna" qual:constant="false" qual:id="sa96"><annotation><rdf:RDF><rdf:Description rdf:about="#s162"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:p38-NFkB_complex|IRF1_phosphorylated" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s162" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="IFN-III" qual:constant="false" qual:id="sa97"><annotation><rdf:RDF><rdf:Description rdf:about="#s167"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:IFN-III_rna" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s167" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="RIG-I" qual:constant="true" qual:id="sa99"><annotation><rdf:RDF>
<rdf:Description rdf:about="#s141">
<bqmodel:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:uniprot:O95786" />
</rdf:Bag>
</bqmodel:is>
<bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:RIG-I" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s141" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description>
</rdf:RDF>
</annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="MAVS" qual:constant="true" qual:id="sa100"><annotation><rdf:RDF>
<rdf:Description rdf:about="#s76">
<bqmodel:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:uniprot:Q7Z434" />
</rdf:Bag>
</bqmodel:is>
<bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:MAVS" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s76" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description>
</rdf:RDF>
</annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="PLPro" qual:constant="true" qual:id="sa101"><annotation><rdf:RDF>
<rdf:Description rdf:about="#s105">
<bqmodel:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:uniprot:P0C6X7" />
</rdf:Bag>
</bqmodel:is>
<bqmodel:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:uniprot:P0C6U8" />
</rdf:Bag>
</bqmodel:is>
<bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:PLPro" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s105" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description>
</rdf:RDF>
</annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="M" qual:constant="true" qual:id="sa103"><annotation><rdf:RDF>
<rdf:Description rdf:about="#s107">
<bqmodel:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:uniprot:P0DTC5" />
</rdf:Bag>
</bqmodel:is>
<bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:M" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s107" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description>
</rdf:RDF>
</annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="dsRNA_vesicle_rna" qual:constant="false" qual:id="sa125"><annotation><rdf:RDF><rdf:Description rdf:about="#s153"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:dsRNA_rna" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s153" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="IRF3_phosphorylated" qual:constant="false" qual:id="sa126"><annotation><rdf:RDF>
<rdf:Description rdf:about="#s159">
<bqmodel:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:uniprot:Q14653" />
</rdf:Bag>
</bqmodel:is>
<bqmodel:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:uniprot:Q14653" />
</rdf:Bag>
</bqmodel:is>
<bqmodel:is>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:uniprot:Q14653" />
</rdf:Bag>
</bqmodel:is>
<bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:RIG-I-MAVS_complex_mitochondria" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s159" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description>
</rdf:RDF>
</annotation></qual:qualitativeSpecies><qual:qualitativeSpecies qual:maxLevel="1" qual:compartment="comp1" qual:name="RNA_rna" qual:constant="true" qual:id="sa128"><annotation><rdf:RDF><rdf:Description rdf:about="#s168"><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:function:RNA_rna" /></rdf:Bag></bqbiol:isDescribedBy><bqbiol:isDescribedBy><rdf:Bag><rdf:li rdf:resource="urn:casq:cdid:s168" /></rdf:Bag></bqbiol:isDescribedBy></rdf:Description></rdf:RDF></annotation></qual:qualitativeSpecies></qual:listOfQualitativeSpecies><qual:listOfTransitions><qual:transition qual:id="tr_csa10"><qual:listOfInputs><qual:input qual:qualitativeSpecies="csa9" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa10_in_0" /><qual:input qual:qualitativeSpecies="csa60" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa10_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa10" qual:transitionEffect="assignmentLevel" qual:id="tr_csa10_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>csa9</ci><cn type="integer">1</cn></apply><apply><eq /><ci>csa60</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><annotation><rdf:RDF><rdf:Description rdf:about="#re12">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:doi:10.3791%2F53575" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_csa4"><qual:listOfInputs><qual:input qual:qualitativeSpecies="csa12" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa4_in_0" /><qual:input qual:qualitativeSpecies="sa10" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa4_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa4" qual:transitionEffect="assignmentLevel" qual:id="tr_csa4_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>csa12</ci><cn type="integer">1</cn></apply><apply><eq /><ci>sa10</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><annotation><rdf:RDF><rdf:Description rdf:about="#re15">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:30936491" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_csa9"><qual:listOfInputs><qual:input qual:qualitativeSpecies="csa10" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa9_in_0" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa9" qual:transitionEffect="assignmentLevel" qual:id="tr_csa9_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><eq /><ci>csa10</ci><cn type="integer">1</cn></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>K_D 15-65 * 10^-9 M
artenobot's avatar
artenobot committed
146
</p>
cylon-x's avatar
cylon-x committed
147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182
</body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#re66">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:doi:10.3791%2F53575" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_csa11"><qual:listOfInputs><qual:input qual:qualitativeSpecies="csa10" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa11_in_0" /><qual:input qual:qualitativeSpecies="sa46" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa11_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa11" qual:transitionEffect="assignmentLevel" qual:id="tr_csa11_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>csa10</ci><cn type="integer">1</cn></apply><apply><eq /><ci>sa46</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><annotation><rdf:RDF><rdf:Description rdf:about="#re58">
<bqbiol:isEncodedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:doi:10.3791%2F53575" />
</rdf:Bag>
</bqbiol:isEncodedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_csa14"><qual:listOfInputs><qual:input qual:qualitativeSpecies="csa12" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa14_in_0" /><qual:input qual:qualitativeSpecies="sa11" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa14_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa14" qual:transitionEffect="assignmentLevel" qual:id="tr_csa14_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>csa12</ci><cn type="integer">1</cn></apply><apply><eq /><ci>sa11</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><annotation><rdf:RDF><rdf:Description rdf:about="#re55">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:30936491" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_csa41"><qual:listOfInputs><qual:input qual:qualitativeSpecies="sa126" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa41_in_0" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa41" qual:transitionEffect="assignmentLevel" qual:id="tr_csa41_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><or /><apply><eq /><ci>sa126</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><annotation><rdf:RDF><rdf:Description rdf:about="#re43">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:25045870" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
<rdf:Description rdf:about="#re47">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:25636800" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_csa15"><qual:listOfInputs><qual:input qual:qualitativeSpecies="csa48" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa15_in_0" /><qual:input qual:qualitativeSpecies="sa70" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa15_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa15" qual:transitionEffect="assignmentLevel" qual:id="tr_csa15_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>csa48</ci><cn type="integer">1</cn></apply><apply><eq /><ci>sa70</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>https://doi.org/10.1101/2020.05.18.102467
artenobot's avatar
artenobot committed
183
</p>
cylon-x's avatar
cylon-x committed
184 185 186 187 188 189 190 191
</body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#re53">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:32680882" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_csa16"><qual:listOfInputs><qual:input qual:qualitativeSpecies="csa44" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa16_in_0" /><qual:input qual:qualitativeSpecies="sa70" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa16_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa16" qual:transitionEffect="assignmentLevel" qual:id="tr_csa16_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>csa44</ci><cn type="integer">1</cn></apply><apply><eq /><ci>sa70</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>https://doi.org/10.1101/2020.05.18.102467
artenobot's avatar
artenobot committed
192
</p>
cylon-x's avatar
cylon-x committed
193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256
</body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#re54">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:32680882" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_csa17"><qual:listOfInputs><qual:input qual:qualitativeSpecies="csa37" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa17_in_0" /><qual:input qual:qualitativeSpecies="sa100" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa17_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa17" qual:transitionEffect="assignmentLevel" qual:id="tr_csa17_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><or /><apply><and /><apply><eq /><ci>csa37</ci><cn type="integer">1</cn></apply><apply><eq /><ci>sa100</ci><cn type="integer">1</cn></apply></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><annotation><rdf:RDF><rdf:Description rdf:about="#re40">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:25636800" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
<rdf:Description rdf:about="#re69">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:25045870" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
<rdf:Description rdf:about="#re2">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:25636800" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_csa12"><qual:listOfInputs><qual:input qual:qualitativeSpecies="sa4" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa12_in_0" /><qual:input qual:qualitativeSpecies="csa10" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa12_in_1" /><qual:input qual:qualitativeSpecies="sa6" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa12_in_2" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa12" qual:transitionEffect="assignmentLevel" qual:id="tr_csa12_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><or /><apply><and /><apply><eq /><ci>sa4</ci><cn type="integer">1</cn></apply><apply><eq /><ci>csa10</ci><cn type="integer">1</cn></apply></apply><apply><and /><apply><eq /><ci>sa6</ci><cn type="integer">1</cn></apply><apply><eq /><ci>csa10</ci><cn type="integer">1</cn></apply></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><annotation><rdf:RDF><rdf:Description rdf:about="#re14">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:30936491" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
<rdf:Description rdf:about="#re3">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:30936491" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
<rdf:Description rdf:about="#re4">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:30936491" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_csa21"><qual:listOfInputs><qual:input qual:qualitativeSpecies="sa82" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa21_in_0" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa21" qual:transitionEffect="assignmentLevel" qual:id="tr_csa21_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><eq /><ci>sa82</ci><cn type="integer">1</cn></apply></math></qual:functionTerm></qual:listOfFunctionTerms><annotation><rdf:RDF><rdf:Description rdf:about="#re31">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:25636800" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_csa44"><qual:listOfInputs><qual:input qual:qualitativeSpecies="csa47" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa44_in_0" /><qual:input qual:qualitativeSpecies="csa48" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa44_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa44" qual:transitionEffect="assignmentLevel" qual:id="tr_csa44_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>csa47</ci><cn type="integer">1</cn></apply><apply><eq /><ci>csa48</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><annotation><rdf:RDF><rdf:Description rdf:about="#re52">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:32680882" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_csa35"><qual:listOfInputs><qual:input qual:qualitativeSpecies="sa103" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa35_in_0" /><qual:input qual:qualitativeSpecies="sa99" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa35_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa35" qual:transitionEffect="assignmentLevel" qual:id="tr_csa35_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>sa103</ci><cn type="integer">1</cn></apply><apply><eq /><ci>sa99</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>not yet confirmed for SARS-CoV-2!
artenobot's avatar
artenobot committed
257 258
doi.org/10.3892/ijmm.2020.4636
</p>
cylon-x's avatar
cylon-x committed
259 260 261 262 263 264 265 266
</body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#re68">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:32626922" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_csa36"><qual:listOfInputs><qual:input qual:qualitativeSpecies="sa99" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa36_in_0" /><qual:input qual:qualitativeSpecies="sa82" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa36_in_1" /><qual:input qual:qualitativeSpecies="csa37" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa36_in_2" /><qual:input qual:qualitativeSpecies="sa101" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa36_in_3" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa36" qual:transitionEffect="assignmentLevel" qual:id="tr_csa36_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><or /><apply><and /><apply><eq /><ci>sa99</ci><cn type="integer">1</cn></apply><apply><eq /><ci>sa82</ci><cn type="integer">1</cn></apply></apply><apply><and /><apply><eq /><ci>csa37</ci><cn type="integer">1</cn></apply><apply><eq /><ci>sa101</ci><cn type="integer">1</cn></apply></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>only confirmed for SARS-CoV!
artenobot's avatar
artenobot committed
267
</p>
cylon-x's avatar
cylon-x committed
268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310
</body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#re18">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:25045870" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
<rdf:Description rdf:about="#re71">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:25554382" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_csa37"><qual:listOfInputs><qual:input qual:qualitativeSpecies="csa36" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa37_in_0" /><qual:input qual:qualitativeSpecies="csa38" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa37_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa37" qual:transitionEffect="assignmentLevel" qual:id="tr_csa37_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>csa36</ci><cn type="integer">1</cn></apply><apply><eq /><ci>csa38</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><annotation><rdf:RDF><rdf:Description rdf:about="#re70">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:22390971" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_csa53"><qual:listOfInputs><qual:input qual:qualitativeSpecies="sa14" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa53_in_0" /><qual:input qual:qualitativeSpecies="csa44" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa53_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa53" qual:transitionEffect="assignmentLevel" qual:id="tr_csa53_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>sa14</ci><cn type="integer">1</cn></apply><apply><eq /><ci>csa44</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><annotation><rdf:RDF><rdf:Description rdf:about="#re20">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:30936491" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_csa34"><qual:listOfInputs><qual:input qual:qualitativeSpecies="csa10" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa34_in_0" /><qual:input qual:qualitativeSpecies="sa45" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa34_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa34" qual:transitionEffect="assignmentLevel" qual:id="tr_csa34_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>csa10</ci><cn type="integer">1</cn></apply><apply><eq /><ci>sa45</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><annotation><rdf:RDF><rdf:Description rdf:about="#re59">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:doi:10.3791%2F53575" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_csa59"><qual:listOfInputs><qual:input qual:qualitativeSpecies="sa14" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa59_in_0" /><qual:input qual:qualitativeSpecies="csa44" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa59_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa59" qual:transitionEffect="assignmentLevel" qual:id="tr_csa59_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>sa14</ci><cn type="integer">1</cn></apply><apply><eq /><ci>csa44</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><annotation><rdf:RDF><rdf:Description rdf:about="#re21">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:30936491" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_csa60"><qual:listOfInputs><qual:input qual:qualitativeSpecies="sa97" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa60_in_0" /><qual:input qual:qualitativeSpecies="csa10" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_csa60_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="csa60" qual:transitionEffect="assignmentLevel" qual:id="tr_csa60_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><or /><apply><eq /><ci>sa97</ci><cn type="integer">1</cn></apply><apply><eq /><ci>csa10</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>K_D 15-65 * 10^-9 M
artenobot's avatar
artenobot committed
311
</p>
cylon-x's avatar
cylon-x committed
312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335
</body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#re66">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:doi:10.3791%2F53575" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_sa14"><qual:listOfInputs><qual:input qual:qualitativeSpecies="sa16" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa14_in_0" /><qual:input qual:qualitativeSpecies="csa4" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa14_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="sa14" qual:transitionEffect="assignmentLevel" qual:id="tr_sa14_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>sa16</ci><cn type="integer">1</cn></apply><apply><eq /><ci>csa4</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><annotation><rdf:RDF><rdf:Description rdf:about="#re10">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:30936491" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_sa76"><qual:listOfInputs><qual:input qual:qualitativeSpecies="sa75" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa76_in_0" /><qual:input qual:qualitativeSpecies="sa80" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa76_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="sa76" qual:transitionEffect="assignmentLevel" qual:id="tr_sa76_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>sa75</ci><cn type="integer">1</cn></apply><apply><eq /><ci>sa80</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>described for SARS-CoV, proposed to be the same in SARS-CoV-2 because of high sequence homology
</p>
</body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#re25">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:doi:10.1016%2Fj.chom.2020.05.008" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_sa77"><qual:listOfInputs><qual:input qual:qualitativeSpecies="sa76" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa77_in_0" /><qual:input qual:qualitativeSpecies="sa81" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa77_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="sa77" qual:transitionEffect="assignmentLevel" qual:id="tr_sa77_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><and /><apply><eq /><ci>sa76</ci><cn type="integer">1</cn></apply><apply><eq /><ci>sa81</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>described for SARS-CoV, proposed to be the same in SARS-CoV-2 because of high sequence homology
artenobot's avatar
artenobot committed
336 337 338 339 340 341 342 343
</p>
</body></html></notes><annotation><rdf:RDF><rdf:Description rdf:about="#re26">
<bqbiol:occursIn>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:doi:10.1016%2Fj.chom.2020.05.008" />
</rdf:Bag>
</bqbiol:occursIn>
</rdf:Description>
cylon-x's avatar
cylon-x committed
344 345 346 347 348 349 350 351
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_sa82"><qual:listOfInputs><qual:input qual:qualitativeSpecies="sa125" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa82_in_0" /><qual:input qual:qualitativeSpecies="sa128" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa82_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="sa82" qual:transitionEffect="assignmentLevel" qual:id="tr_sa82_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><or /><apply><eq /><ci>sa125</ci><cn type="integer">1</cn></apply><apply><eq /><ci>sa128</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms></qual:transition><qual:transition qual:id="tr_sa92"><qual:listOfInputs><qual:input qual:qualitativeSpecies="csa21" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa92_in_0" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="sa92" qual:transitionEffect="assignmentLevel" qual:id="tr_sa92_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><eq /><ci>csa21</ci><cn type="integer">1</cn></apply></math></qual:functionTerm></qual:listOfFunctionTerms><annotation><rdf:RDF><rdf:Description rdf:about="#re32">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:25045870" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition><qual:transition qual:id="tr_sa96"><qual:listOfInputs><qual:input qual:qualitativeSpecies="csa41" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa96_in_0" /><qual:input qual:qualitativeSpecies="sa92" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa96_in_1" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="sa96" qual:transitionEffect="assignmentLevel" qual:id="tr_sa96_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><or /><apply><eq /><ci>csa41</ci><cn type="integer">1</cn></apply><apply><eq /><ci>sa92</ci><cn type="integer">1</cn></apply></apply></math></qual:functionTerm></qual:listOfFunctionTerms><notes><html xmlns="http://www.w3.org/1999/xhtml"><head><title /></head><body><p>https://www.nature.com/articles/ni.2924
artenobot's avatar
artenobot committed
352
</p>
cylon-x's avatar
cylon-x committed
353 354 355 356 357 358 359 360
</body></html></notes></qual:transition><qual:transition qual:id="tr_sa97"><qual:listOfInputs><qual:input qual:qualitativeSpecies="sa96" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa97_in_0" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="sa97" qual:transitionEffect="assignmentLevel" qual:id="tr_sa97_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><eq /><ci>sa96</ci><cn type="integer">1</cn></apply></math></qual:functionTerm></qual:listOfFunctionTerms></qual:transition><qual:transition qual:id="tr_sa125"><qual:listOfInputs><qual:input qual:qualitativeSpecies="sa82" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa125_in_0" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="sa125" qual:transitionEffect="assignmentLevel" qual:id="tr_sa125_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><eq /><ci>sa82</ci><cn type="integer">1</cn></apply></math></qual:functionTerm></qual:listOfFunctionTerms></qual:transition><qual:transition qual:id="tr_sa126"><qual:listOfInputs><qual:input qual:qualitativeSpecies="csa17" qual:transitionEffect="none" qual:sign="positive" qual:id="tr_sa126_in_0" /></qual:listOfInputs><qual:listOfOutputs><qual:output qual:qualitativeSpecies="sa126" qual:transitionEffect="assignmentLevel" qual:id="tr_sa126_out" /></qual:listOfOutputs><qual:listOfFunctionTerms><qual:defaultTerm qual:resultLevel="0" /><qual:functionTerm qual:resultLevel="1"><math xmlns="http://www.w3.org/1998/Math/MathML"><apply><eq /><ci>csa17</ci><cn type="integer">1</cn></apply></math></qual:functionTerm></qual:listOfFunctionTerms><annotation><rdf:RDF><rdf:Description rdf:about="#re28">
<bqbiol:isDescribedBy>
<rdf:Bag>
<rdf:li rdf:resource="urn:miriam:pubmed:25636800" />
</rdf:Bag>
</bqbiol:isDescribedBy>
</rdf:Description>
</rdf:RDF></annotation></qual:transition></qual:listOfTransitions></model></sbml>