Bugfixes in interface

bin/substrates.py

@@ -983,7 +983,6 @@ class SubstrateTab(object):
                     
                 else:
                     if self.color_physiboss and self.color_physiboss_node is not None and self.color_physiboss_node[0] != '<':
-                        
                         if int(child.attrib['id'][4:]) in states_dict.keys():
                             if self.color_physiboss_node in states_dict[int(child.attrib['id'][4:])]:
                                 rgb = [0, 0.5, 0]

data/PhysiCell_settings.xml

@@ -113,7 +113,7 @@
 		</full_data>
 		
 		<SVG>
-			<interval units="min">15</interval>
+			<interval units="min">5</interval>
 			<enable>true</enable>
 		</SVG>
 		

data/initial.xml

@@ -11,9 +11,9 @@
 		</software>
 		<citation />
 		<current_time units="min">0.000000</current_time>
-		<current_runtime units="sec">0.133552</current_runtime>
-		<created>2020-10-23T16:20:55Z</created>
-		<last_modified>2020-10-23T16:20:55Z</last_modified>
+		<current_runtime units="sec">0.137806</current_runtime>
+		<created>2020-10-26T10:21:52Z</created>
+		<last_modified>2020-10-26T10:21:52Z</last_modified>
 	</metadata>
 	<microenvironment>
 		<domain name="microenvironment">

pc4covid19.ipynb

 %% Cell type:code id: tags:
 
 ``` python
 from IPython.core.display import display, HTML
 display(HTML("<style>.container { width:100% !important; }</style>"))
 %matplotlib inline
 ```
 
-%%%% Output: display_data
-
-
 %% Cell type:code id: tags:
 
 ``` python
 import sys, os
 sys.path.insert(0, os.path.abspath('bin'))
 import pc4covid19
 ```
 
-%%%% Output: display_data
-
-
 %% Cell type:code id: tags:
 
 ``` python
 pc4covid19.gui
 ```
 
-%%%% Output: display_data
-
-
 %% Cell type:code id: tags:
 
 ``` python
 #from debug import debug_view
 #debug_view
 ```