1. 28 Jul, 2022 2 commits
  2. 27 Jul, 2022 6 commits
    • Tobias Czauderna's avatar
      Update... · c5a0b0e6
      Tobias Czauderna authored
      Update gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_Apoptosis_pathway/C19DMap_Apoptosis_pathway_1.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_Coagulation_pathway/C19DMap_Coagulation_pathway_1.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_E_protein_interactions/C19DMap_E_protein_interactions_1.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_Electron_Transport_Chain_disruption/C19DMap_Electron_Transport_Chain_disruption_2.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_Electron_Transport_Chain_disruption/C19DMap_Electron_Transport_Chain_disruption_1.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_Endoplasmatic_Reticulum_stress/C19DMap_Endoplasmatic_Reticulum_stress_1.gml, 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      Update... · c17eecb0
      Tobias Czauderna authored
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gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP5039/WP5039_5.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP5039/WP5039_14.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP5039/WP5039_3.gml
      c17eecb0
    • Tobias Czauderna's avatar
      Update scripts/apply_force_directed_layout.bsh,... · ba10787f
      Tobias Czauderna authored
      Update scripts/apply_force_directed_layout.bsh, gml_graph_files/gmls/filtered.csv, gml_graph_files/gmls/species.csv, gml_graph_files/gmls_crosslinked/filtered.csv, gml_graph_files/gmls_crosslinked/species.csv, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/R-HSA-9678108.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/R-HSA-9694516.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_Apoptosis_pathway.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_E_protein_interactions.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_Interferon_lambda_pathway.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_Electron_Transport_Chain_disruption.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_Coagulation_pathway.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_Interferon_1_pathway.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_HMOX1_pathway.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_Endoplasmatic_Reticulum_stress.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_JNK_pathway.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_Kynurenine_synthesis_pathway.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_NLRP3_inflammasome_activation.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_Nsp4_and_Nsp6_protein_interactions.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_Nsp9_protein_interactions.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_Nsp14_and_metabolism.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_Orf3a_protein_interactions.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_Orf10_Cul2_pathway.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_PAMP_signalling.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_Pyrimidine_deprivation.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_Renin-angiotensin_pathway.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_SARS-CoV-2_RTC_and_transcription.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_TGFbeta_signalling.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19DMap_Virus_replication_cycle.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WikiPathways.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP4799.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP4846.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP4853.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP4860.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP4861.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP4863.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP4864.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP4868.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP4876.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP4877.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP4880.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP4883.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP4884.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP4904.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP4912.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP4927.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP4936.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP4961.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP4965.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP4969.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP5027.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP5038.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/WP5039.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/COVID19_Disease_Map_bipartite.gml, gml_graph_files/gmls/no_parallel_edges_sub-components_undirected/C19_Disease_Map.gml, gml_graph_files/gmls/parallel_edges/R-HSA-9678108.gml, gml_graph_files/gmls/parallel_edges/R-HSA-9694516.gml, gml_graph_files/gmls/parallel_edges/C19DMap_Apoptosis_pathway.gml, gml_graph_files/gmls/parallel_edges/C19DMap_E_protein_interactions.gml, gml_graph_files/gmls/parallel_edges/C19DMap_JNK_pathway.gml, gml_graph_files/gmls/parallel_edges/C19DMap_Interferon_lambda_pathway.gml, gml_graph_files/gmls/parallel_edges/C19DMap_Electron_Transport_Chain_disruption.gml, gml_graph_files/gmls/parallel_edges/C19DMap_Interferon_1_pathway.gml, gml_graph_files/gmls/parallel_edges/C19DMap_Coagulation_pathway.gml, gml_graph_files/gmls/parallel_edges/C19DMap_HMOX1_pathway.gml, gml_graph_files/gmls/parallel_edges/C19DMap_Endoplasmatic_Reticulum_stress.gml, gml_graph_files/gmls/parallel_edges/C19DMap_Kynurenine_synthesis_pathway.gml, gml_graph_files/gmls/parallel_edges/C19DMap_NLRP3_inflammasome_activation.gml, gml_graph_files/gmls/parallel_edges/C19DMap_Nsp4_and_Nsp6_protein_interactions.gml, gml_graph_files/gmls/parallel_edges/C19DMap_Nsp9_protein_interactions.gml, gml_graph_files/gmls/parallel_edges/C19DMap_Nsp14_and_metabolism.gml, gml_graph_files/gmls/parallel_edges/C19DMap_Orf3a_protein_interactions.gml, gml_graph_files/gmls/parallel_edges/C19DMap_Orf10_Cul2_pathway.gml, gml_graph_files/gmls/parallel_edges/C19DMap_PAMP_signalling.gml, gml_graph_files/gmls/parallel_edges/C19DMap_Pyrimidine_deprivation.gml, gml_graph_files/gmls/parallel_edges/C19DMap_Renin-angiotensin_pathway.gml, gml_graph_files/gmls/parallel_edges/C19DMap_SARS-CoV-2_RTC_and_transcription.gml, gml_graph_files/gmls/parallel_edges/C19DMap_TGFbeta_signalling.gml, gml_graph_files/gmls/parallel_edges/C19DMap_Virus_replication_cycle.gml, gml_graph_files/gmls/parallel_edges/WikiPathways.gml, gml_graph_files/gmls/parallel_edges/WP4799.gml, gml_graph_files/gmls/parallel_edges/WP4853.gml, gml_graph_files/gmls/parallel_edges/WP4846.gml, gml_graph_files/gmls/parallel_edges/WP4861.gml, gml_graph_files/gmls/parallel_edges/WP4863.gml, gml_graph_files/gmls/parallel_edges/WP4860.gml, gml_graph_files/gmls/parallel_edges/WP4864.gml, gml_graph_files/gmls/parallel_edges/WP4868.gml, gml_graph_files/gmls/parallel_edges/WP4876.gml, gml_graph_files/gmls/parallel_edges/WP4880.gml, gml_graph_files/gmls/parallel_edges/WP4877.gml, gml_graph_files/gmls/parallel_edges/WP4883.gml, gml_graph_files/gmls/parallel_edges/WP4884.gml, gml_graph_files/gmls/parallel_edges/WP4904.gml, gml_graph_files/gmls/parallel_edges/WP4912.gml, gml_graph_files/gmls/parallel_edges/WP4927.gml, gml_graph_files/gmls/parallel_edges/WP4936.gml, gml_graph_files/gmls/parallel_edges/WP4961.gml, gml_graph_files/gmls/parallel_edges/WP4965.gml, gml_graph_files/gmls/parallel_edges/WP4969.gml, gml_graph_files/gmls/parallel_edges/WP5027.gml, gml_graph_files/gmls/parallel_edges/WP5038.gml, gml_graph_files/gmls/parallel_edges/WP5039.gml, gml_graph_files/gmls/parallel_edges/COVID19_Disease_Map_bipartite.gml, gml_graph_files/gmls/parallel_edges/C19_Disease_Map.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_Interferon_lambda_pathway.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/R-HSA-9678108.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/R-HSA-9694516.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19_Disease_Map.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_Apoptosis_pathway.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_E_protein_interactions.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_JNK_pathway.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_TGFbeta_signalling.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_NLRP3_inflammasome_activation.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_Orf3a_protein_interactions.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_Electron_Transport_Chain_disruption.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_SARS-CoV-2_RTC_and_transcription.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_Nsp4_and_Nsp6_protein_interactions.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP4799.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_Coagulation_pathway.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_Interferon_1_pathway.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_HMOX1_pathway.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_Kynurenine_synthesis_pathway.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP4846.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_PAMP_signalling.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_Pyrimidine_deprivation.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_Renin-angiotensin_pathway.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_Endoplasmatic_Reticulum_stress.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP4853.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_Orf10_Cul2_pathway.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_Virus_replication_cycle.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_Nsp14_and_metabolism.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/C19DMap_Nsp9_protein_interactions.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WikiPathways.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP4860.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP4861.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP4863.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP4864.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP4868.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP4876.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP4877.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP4880.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP4883.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP4884.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP4904.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP4912.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP4927.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP4936.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP4961.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP4965.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP4969.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP5027.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP5038.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/COVID19_Disease_Map_bipartite_crosslinked.gml, gml_graph_files/gmls_crosslinked/no_parallel_edges_sub-components_undirected/WP5039.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_Interferon_lambda_pathway.gml, gml_graph_files/gmls_crosslinked/parallel_edges/R-HSA-9678108.gml, gml_graph_files/gmls_crosslinked/parallel_edges/R-HSA-9694516.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_Apoptosis_pathway.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19_Disease_Map.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_E_protein_interactions.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_Coagulation_pathway.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_Electron_Transport_Chain_disruption.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_HMOX1_pathway.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_Interferon_1_pathway.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_Endoplasmatic_Reticulum_stress.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_Kynurenine_synthesis_pathway.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_NLRP3_inflammasome_activation.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_JNK_pathway.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_Nsp4_and_Nsp6_protein_interactions.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_Nsp9_protein_interactions.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_Nsp14_and_metabolism.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_Orf3a_protein_interactions.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_Orf10_Cul2_pathway.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_PAMP_signalling.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_Pyrimidine_deprivation.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_Renin-angiotensin_pathway.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_SARS-CoV-2_RTC_and_transcription.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_TGFbeta_signalling.gml, gml_graph_files/gmls_crosslinked/parallel_edges/C19DMap_Virus_replication_cycle.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WikiPathways.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP4799.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP4846.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP4853.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP4860.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP4861.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP4863.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP4864.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP4868.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP4876.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP4877.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP4880.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP4883.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP4884.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP4904.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP4912.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP4927.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP4936.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP4961.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP4965.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP4969.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP5027.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP5038.gml, gml_graph_files/gmls_crosslinked/parallel_edges/WP5039.gml, gml_graph_files/gmls_crosslinked/parallel_edges/COVID19_Disease_Map_bipartite_crosslinked.gml
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    • Tobias Czauderna's avatar
      Update scripts/apply_force_directed_layout.bsh, scripts/create_gmls.py,... · 55792350
      Tobias Czauderna authored
      Update scripts/apply_force_directed_layout.bsh, scripts/create_gmls.py, scripts/save_all_networks.bsh, scripts/save_connected_components_gml.bsh
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      Update README.md · 803b616f
      Tobias Czauderna authored
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      Update archive/scripts/C19-DMs_append_rename_merge.bsh,... · 9e3ed573
      Tobias Czauderna authored
      Update archive/scripts/C19-DMs_append_rename_merge.bsh, archive/scripts/C19-DMs_remove_loops_parallel_edges_save.bsh, archive/scripts/get_model_data.py, archive/scripts/requirements.txt, archive/gml_graph_files/directed/Apoptosis_pathway_dir.gml, archive/gml_graph_files/directed/Coagulation_pathway_dir.gml, archive/gml_graph_files/directed/E_protein_interactions_dir.gml, archive/gml_graph_files/directed/Electron_Transport_Chain_disruption_dir.gml, archive/gml_graph_files/directed/Endoplasmatic_Reticulum_stress_dir.gml, archive/gml_graph_files/directed/HMOX1_pathway_dir.gml, archive/gml_graph_files/directed/Interferon_1_pathway_dir.gml, archive/gml_graph_files/directed/Interferon_lambda_pathway_dir.gml, archive/gml_graph_files/directed/JNK_pathway_dir.gml, archive/gml_graph_files/directed/Kynurenine_synthesis_pathway_dir.gml, archive/gml_graph_files/directed/NLRP3_inflammasome_activation_dir.gml, archive/gml_graph_files/directed/Nsp14_and_metabolism_dir.gml, archive/gml_graph_files/directed/Nsp4_and_Nsp6_protein_interactions_dir.gml, archive/gml_graph_files/directed/Nsp9_protein_interactions_dir.gml, archive/gml_graph_files/directed/Orf10_Cul2_pathway_dir.gml, archive/gml_graph_files/directed/Orf3a_protein_interactions_dir.gml, archive/gml_graph_files/directed/PAMP_signalling_dir.gml, archive/gml_graph_files/directed/Pyrimidine_deprivation_dir.gml, archive/gml_graph_files/directed/Renin-angiotensin_pathway_dir.gml, archive/gml_graph_files/directed/SARS-CoV-2_RTC_and_transcription_dir.gml, archive/gml_graph_files/directed/TGFbeta_signalling_dir.gml, archive/gml_graph_files/directed/Virus_replication_cycle_dir.gml, archive/gml_graph_files/directed/aggregated_model_dir.gml, archive/gml_graph_files/undirected/Apoptosis_pathway_undir.gml, archive/gml_graph_files/undirected/Coagulation_pathway_undir.gml, archive/gml_graph_files/undirected/E_protein_interactions_undir.gml, archive/gml_graph_files/undirected/Electron_Transport_Chain_disruption_undir.gml, archive/gml_graph_files/undirected/Endoplasmatic_Reticulum_stress_undir.gml, archive/gml_graph_files/undirected/HMOX1_pathway_undir.gml, archive/gml_graph_files/undirected/Interferon_1_pathway_undir.gml, archive/gml_graph_files/undirected/Interferon_lambda_pathway_undir.gml, archive/gml_graph_files/undirected/JNK_pathway_undir.gml, archive/gml_graph_files/undirected/Kynurenine_synthesis_pathway_undir.gml, archive/gml_graph_files/undirected/NLRP3_inflammasome_activation_undir.gml, archive/gml_graph_files/undirected/Nsp14_and_metabolism_undir.gml, archive/gml_graph_files/undirected/Nsp4_and_Nsp6_protein_interactions_undir.gml, archive/gml_graph_files/undirected/Nsp9_protein_interactions_undir.gml, archive/gml_graph_files/undirected/Orf10_Cul2_pathway_undir.gml, archive/gml_graph_files/undirected/Orf3a_protein_interactions_undir.gml, archive/gml_graph_files/undirected/PAMP_signalling_undir.gml, archive/gml_graph_files/undirected/Pyrimidine_deprivation_undir.gml, archive/gml_graph_files/undirected/Renin-angiotensin_pathway_undir.gml, archive/gml_graph_files/undirected/SARS-CoV-2_RTC_and_transcription_undir.gml, archive/gml_graph_files/undirected/TGFbeta_signalling_undir.gml, archive/gml_graph_files/undirected/Virus_replication_cycle_undir.gml, archive/gml_graph_files/undirected/aggregated_model_undir.gml, archive/centrality_analysis_results/PWAffiliationTop100.xlsx, archive/centrality_analysis_results/TopRanked_Agg_undir__woReactionsSmallMol_Top100.xlsx, archive/centrality_analysis_results/TopRanked_PWCCs_undir__woReactionsSmallMol_Top100.xlsx, archive/centrality_analysis_results/top100_aggrank_agggraph.txt, archive/paper-figs/pipeline-overview.png, archive/README.md
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  3. 02 Sep, 2021 1 commit
  4. 12 May, 2021 6 commits
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  8. 28 Apr, 2021 3 commits