Commit 4f3cab06 authored by Cedric Laczny's avatar Cedric Laczny

Update README to include preparation instructions.

parent 7e5f072d
# Preparation
On the `gaia` cluster
```
oarsub -I
export PYTHONPATH=
ml lang/Python/3.6.4-foss-2018a
virtualenv venv
. venv/bin/activate
which python && python -V
pip install snakemake --no-cache-dir # Needed in case of my b0rked environment
```
# Basics
```
snakemake -s 01-basics.smk # Generate the *default* target
......
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