From f3aaafecc45e0d346906875724abf365dd57d8c5 Mon Sep 17 00:00:00 2001
From: Carlos Vega <carlos.vega@uni.lu>
Date: Wed, 20 Nov 2019 10:49:52 +0100
Subject: [PATCH] added base url and sparql translator uri
---
biokb/textminingservice_biokb/biokb.py | 8 ++++++--
1 file changed, 6 insertions(+), 2 deletions(-)
diff --git a/biokb/textminingservice_biokb/biokb.py b/biokb/textminingservice_biokb/biokb.py
index a88f3ab..02ebb8e 100644
--- a/biokb/textminingservice_biokb/biokb.py
+++ b/biokb/textminingservice_biokb/biokb.py
@@ -22,8 +22,12 @@ class MalformedQueryException(BioKBClientException):
class BioKBService(TextMiningService):
- def __init__(self, sparql_url="http://10.240.6.71:8890/sparql"):
- self.sparql = SPARQLWrapper(sparql_url)
+ SOLR_TRANSLATOR_URL = 'https://biokb.lcsb.uni.lu/api/solr-ids-to-publications'
+ # ?solrIds=4b267858-bbde-11e5-9b9d-001a4ae51247&solrIds=593fa4e6-c87e-11e8-ac16-001a4a160176
+ SPARQL_URL = 'http://10.240.6.71:8890/sparql'
+
+ def __init__(self):
+ self.sparql = SPARQLWrapper(BioKBService.SPARQL_URL)
self.sparql.setRequestMethod(POSTDIRECTLY)
super().__init__('BioKB',
'This client communicates with BioKB triple store and Publication Solr index.')
--
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