From 6c332797e2c3711318607b14e9b94cd6ec420674 Mon Sep 17 00:00:00 2001
From: Carlos Vega <carlos.vega@uni.lu>
Date: Tue, 19 Nov 2019 12:23:11 +0100
Subject: [PATCH] changed sparql wrapper to do POST requests instead of GET
requests
---
biokb/biokb.py | 3 ++-
1 file changed, 2 insertions(+), 1 deletion(-)
diff --git a/biokb/biokb.py b/biokb/biokb.py
index acbd1c5..214e4c1 100644
--- a/biokb/biokb.py
+++ b/biokb/biokb.py
@@ -4,7 +4,7 @@ from models.publication import Publication
from models.coocurrence import CoOccurrence
from utils import uri_to_entity_code, standarise_underscored_entity_code
-from SPARQLWrapper import SPARQLWrapper, JSON
+from SPARQLWrapper import SPARQLWrapper, JSON, POSTDIRECTLY
from SPARQLWrapper.SPARQLExceptions import EndPointNotFound, EndPointInternalError, QueryBadFormed
import logging
@@ -22,6 +22,7 @@ class MalformedQueryException(BioKBClientException):
class BioKBservice(TextMiningService):
def __init__(self, sparql_url="https://biokb.lcsb.uni.lu/sparql"):
self.sparql = SPARQLWrapper(sparql_url)
+ self.sparql.setRequestMethod(POSTDIRECTLY)
super().__init__('BioKB',
'This client communicates with BioKB triple store and Publication Solr index.')
--
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