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  • Aurélien Ginolhac
  • snakemake-rna-seqsnakemake-rna-seq
  • Issues
  • #11

Closed
Open
Created Dec 08, 2021 by Aurélien Ginolhac@aurelien.ginolhac🚴Owner

check that samples in any config files are not duplicated

For example detect those mistakes:

T4H-B6  1       fastq/T4H-B6_drna_FUSR3_MDM_S7_R1_001.fastq.gz  NA      reverse
T4HFN-B6        1       fastq/T4HFN-B6_drna_FUSR3_MDM_S8_R1_001.fastq.gz        NA      reverse
T24H-B6 1       fastq/T24H-B6_drna_FUSR3_MDM_S9_R1_001.fastq.gz NA      reverse
T24HFN-B6       1       fastq/T24HFN-B6_drna_FUSR3_MDM_S10_R1_001.fastq.gz      NA      reverse
T24HFN-B6       1       fastq/T24HFN-B6_drna_FUSR3_MDM_S10_R1_001.fastq.gz      NA      reverse

T24HFN-B6 is present twice

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