This function transforms SNP data (local machine).

get.snps.geuvadis(chr, data = NULL, path = getwd())

Arguments

chr

chromosome: integer \(1-22\)

data

local directory for VCF (variant call format) and SDRF (sample and data relationship format) files

path

local directory for output

Examples

path <- "C:/Users/a.rauschenbe/Desktop/spliceQTL/data"