On the virtual machine, execute this chunk to prepare the data. See the documentation of the R package spliceQTL for further information.
On the virtual machine, execute this chunk to prepare the data. See the documentation of the R package spliceQTL for further information. (It seems that lme4::lmer in spliceQTL::adjust.covariates fails to release memory. Restart R after each chromosome.)
On the virtual machine, first restart R and then execute this chunk to test for alternative splicing. (It seems that lme4::lmer in spliceQTL::adjust.covariates fails to release memory on Linux.)
On the virtual machine, execute this chunk to test for alternative splicing.