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Commit 5b89a40c authored by Armin Rauschenberger's avatar Armin Rauschenberger
Browse files

initialise

parent bcfdcc05
Package: cornet
Package: mixnet
Version: 0.0.1
Title: Elastic Net with Dichotomised Outcomes
Description: Implements lasso and ridge regression for dichotomised outcomes (Rauschenberger et al. 2019). Such outcomes are not naturally but artificially binary. They indicate whether an underlying measurement is greater than a threshold.
Title: Multivariate Regression
Description: Implements high-dimensional multivariate regression by stacking (Rauschenberger et al. 2019).
Depends: R (>= 3.0.0)
Imports: glmnet, palasso
Suggests: knitr, testthat
Enhances: RColorBrewer
Authors@R: person("Armin","Rauschenberger",email="a.rauschenberger@vumc.nl",role=c("aut","cre"))
Imports: glmnet, palasso, cornet
Suggests: knitr, testthat, MASS
Enhances: RColorBrewer, spls, SiER, MRCE
Authors@R: person("Armin","Rauschenberger",email="armin.rauschenberger@uni.lu",role=c("aut","cre"))
VignetteBuilder: knitr
License: GPL-3
LazyData: true
Language: en-GB
RoxygenNote: 6.1.1
URL: https://github.com/rauschenberger/cornet
BugReports: https://github.com/rauschenberger/cornet/issues
URL: https://github.com/rauschenberger/stanet
BugReports: https://github.com/rauschenberger/stanet/issues
# Generated by roxygen2: do not edit by hand
S3method(coef,cornet)
S3method(plot,cornet)
S3method(predict,cornet)
S3method(print,cornet)
export(cornet)
S3method(coef,mixnet)
S3method(predict,mixnet)
S3method(weights,mixnet)
export(mixnet)
importFrom(stats,weights)
## cornet 0.0.1 (2019-03-15)
## mixnet 0.0.1 (2019-06-01)
* first submission
\ No newline at end of file
This diff is collapsed.
---
pagetitle: cornet
pagetitle: stanet
output: github_document
editor_options:
chunk_output_type: console
......@@ -15,29 +15,29 @@ knitr::opts_chunk$set(
)
```
[![Travis-CI Build Status](https://travis-ci.org/rauschenberger/cornet.svg)](https://travis-ci.org/rauschenberger/cornet)
[![AppVeyor build status](https://ci.appveyor.com/api/projects/status/github/rauschenberger/cornet?svg=true)](https://ci.appveyor.com/project/rauschenberger/cornet)
[![Coverage Status](https://codecov.io/github/rauschenberger/cornet/coverage.svg?branch=master)](https://codecov.io/github/rauschenberger/cornet)
[![Travis-CI Build Status](https://travis-ci.org/rauschenberger/stanet.svg)](https://travis-ci.org/rauschenberger/stanet)
[![AppVeyor build status](https://ci.appveyor.com/api/projects/status/github/rauschenberger/stanet?svg=true)](https://ci.appveyor.com/project/rauschenberger/stanet)
[![Coverage Status](https://codecov.io/github/rauschenberger/stanet/coverage.svg?branch=master)](https://codecov.io/github/rauschenberger/stanet)
## Scope
Lasso and ridge regression for dichotomised outcomes (extending [glmnet](https://CRAN.R-project.org/package=glmnet)).
Stacked Elastic Net Regression (extending [glmnet](https://CRAN.R-project.org/package=glmnet)).
## Installation
Install the current release from [CRAN](https://CRAN.R-project.org/package=cornet):
Install the current release from [CRAN](https://CRAN.R-project.org/package=stanet):
```{r,eval=FALSE}
install.packages("cornet")
install.packages("stanet")
```
or the latest development version from [GitHub](https://github.com/rauschenberger/cornet):
or the latest development version from [GitHub](https://github.com/rauschenberger/stanet):
```{r,eval=FALSE}
#install.packages("devtools")
devtools::install_github("rauschenberger/cornet")
devtools::install_github("rauschenberger/stanet")
```
## Reference
Armin Rauschenberger and Enrico Glaab (2019). "Lasso and ridge regression for dichotomised outcomes". *Manuscript in preparation.*
*Manuscript in preparation.*
......@@ -9,10 +9,10 @@ authors:
home:
links:
- text: "Download package"
href: https://github.com/rauschenberger/cornet
href: https://github.com/rauschenberger/stanet
navbar:
title: "cornet"
title: "stanet"
left:
- text: "functions"
href: reference/index.html
......@@ -24,22 +24,16 @@ navbar:
href: news/index.html
right:
- icon: fa-github
href: https://github.com/rauschenberger/cornet
href: https://github.com/rauschenberger/stanet
- icon: fa-download
href: https://cran.r-project.org/package=cornet
href: https://cran.r-project.org/package=stanet
reference:
- title: "User functions"
contents:
- cornet
- predict.cornet
- coef.cornet
- plot.cornet
- print.cornet
- stacker
- predict.stacker
- coef.stacker
- weights.stacker
- title: "Internal functions"
contents:
- .simulate
- .test
- .compare
- .equal
- .check
Thanks!
# Changes
- examples without \donttest{}, or with \donttest{} and \dontshow{}
# Notes
- DOI will be added after publication.
\ No newline at end of file
......@@ -5,11 +5,11 @@
<meta charset="utf-8">
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>Lasso and ridge regression for dichotomised outcomes • cornet</title>
<title>Stacked Elastic Net • mixnet</title>
<!-- jquery --><script src="https://code.jquery.com/jquery-3.1.0.min.js" integrity="sha384-nrOSfDHtoPMzJHjVTdCopGqIqeYETSXhZDFyniQ8ZHcVy08QesyHcnOUpMpqnmWq" crossorigin="anonymous"></script><!-- Bootstrap --><link href="https://maxcdn.bootstrapcdn.com/bootswatch/3.3.7/spacelab/bootstrap.min.css" rel="stylesheet" crossorigin="anonymous">
<script src="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.7/js/bootstrap.min.js" integrity="sha384-Tc5IQib027qvyjSMfHjOMaLkfuWVxZxUPnCJA7l2mCWNIpG9mGCD8wGNIcPD7Txa" crossorigin="anonymous"></script><!-- Font Awesome icons --><link href="https://maxcdn.bootstrapcdn.com/font-awesome/4.6.3/css/font-awesome.min.css" rel="stylesheet" integrity="sha384-T8Gy5hrqNKT+hzMclPo118YTQO6cYprQmhrYwIiQ/3axmI1hQomh7Ud2hPOy8SP1" crossorigin="anonymous">
<!-- clipboard.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/1.7.1/clipboard.min.js" integrity="sha384-cV+rhyOuRHc9Ub/91rihWcGmMmCXDeksTtCihMupQHSsi8GIIRDG0ThDc3HGQFJ3" crossorigin="anonymous"></script><!-- sticky kit --><script src="https://cdnjs.cloudflare.com/ajax/libs/sticky-kit/1.1.3/sticky-kit.min.js" integrity="sha256-c4Rlo1ZozqTPE2RLuvbusY3+SU1pQaJC0TjuhygMipw=" crossorigin="anonymous"></script><!-- pkgdown --><link href="../pkgdown.css" rel="stylesheet">
<script src="../pkgdown.js"></script><meta property="og:title" content="Lasso and ridge regression for dichotomised outcomes">
<script src="../pkgdown.js"></script><meta property="og:title" content="Stacked Elastic Net">
<meta property="og:description" content="">
<meta name="twitter:card" content="summary">
<!-- mathjax --><script src="https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script><!--[if lt IE 9]>
......@@ -28,7 +28,7 @@
<span class="icon-bar"></span>
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">cornet</a>
<a class="navbar-link" href="../index.html">mixnet</a>
<span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.0.1</span>
</span>
</div>
......@@ -50,13 +50,13 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/rauschenberger/cornet">
<a href="https://github.com/rauschenberger/stanet">
<span class="fa fa-github"></span>
</a>
</li>
<li>
<a href="https://cran.r-project.org/package=cornet">
<a href="https://cran.r-project.org/package=stanet">
<span class="fa fa-download"></span>
</a>
......@@ -73,21 +73,21 @@
</header><div class="row">
<div class="col-md-9 contents">
<div class="page-header toc-ignore">
<h1>Lasso and ridge regression for dichotomised outcomes</h1>
<h1>Stacked Elastic Net</h1>
<small class="dont-index">Source: <a href="https://github.com/rauschenberger/cornet/blob/master/vignettes/article.Rmd"><code>vignettes/article.Rmd</code></a></small>
<small class="dont-index">Source: <a href="https://github.com/rauschenberger/stanet/blob/master/vignettes/article.Rmd"><code>vignettes/article.Rmd</code></a></small>
<div class="hidden name"><code>article.Rmd</code></div>
</div>
<p>The <code>cornet</code> manuscript is in preparation. Click <a href="https://CRAN.R-project.org/package=cornet">here</a> for the R package.</p>
<p>The <code>mixnet</code> manuscript is in preparation. Click <a href="https://CRAN.R-project.org/package=mixnet">here</a> for the R package.</p>
<div id="reference" class="section level2">
<h2 class="hasAnchor">
<a href="#reference" class="anchor"></a>Reference</h2>
<p>Armin Rauschenberger and Enrico Glaab (2019). “Lasso and ridge regression for dichotomised outcomes”. <em>Manuscript in preparation.</em></p>
<p>Armin Rauschenberger and Enrico Glaab (2019). “Multivariate regression through stacked generalisation”. <em>Manuscript in preparation.</em></p>
</div>
</div>
......
......@@ -6,7 +6,7 @@
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>Articles • cornet</title>
<title>Articles • mixnet</title>
<!-- jquery -->
<script src="https://code.jquery.com/jquery-3.1.0.min.js" integrity="sha384-nrOSfDHtoPMzJHjVTdCopGqIqeYETSXhZDFyniQ8ZHcVy08QesyHcnOUpMpqnmWq" crossorigin="anonymous"></script>
......@@ -57,7 +57,7 @@
<span class="icon-bar"></span>
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">cornet</a>
<a class="navbar-link" href="../index.html">mixnet</a>
<span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.0.1</span>
</span>
</div>
......@@ -80,13 +80,13 @@
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/rauschenberger/cornet">
<a href="https://github.com/rauschenberger/stanet">
<span class="fa fa-github"></span>
</a>
</li>
<li>
<a href="https://cran.r-project.org/package=cornet">
<a href="https://cran.r-project.org/package=stanet">
<span class="fa fa-download"></span>
</a>
......@@ -111,8 +111,8 @@
<p class="section-desc"></p>
<ul>
<li><a href="article.html">Lasso and ridge regression for dichotomised outcomes</a></li>
<li><a href="vignette.html">Combined Regression</a></li>
<li><a href="article.html">Stacked Elastic Net</a></li>
<li><a href="vignette.html">Multivariate Elastic Net</a></li>
</ul>
</div>
</div>
......
......@@ -5,11 +5,11 @@
<meta charset="utf-8">
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>Combined Regression • cornet</title>
<title>Multivariate Elastic Net • mixnet</title>
<!-- jquery --><script src="https://code.jquery.com/jquery-3.1.0.min.js" integrity="sha384-nrOSfDHtoPMzJHjVTdCopGqIqeYETSXhZDFyniQ8ZHcVy08QesyHcnOUpMpqnmWq" crossorigin="anonymous"></script><!-- Bootstrap --><link href="https://maxcdn.bootstrapcdn.com/bootswatch/3.3.7/spacelab/bootstrap.min.css" rel="stylesheet" crossorigin="anonymous">
<script src="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.7/js/bootstrap.min.js" integrity="sha384-Tc5IQib027qvyjSMfHjOMaLkfuWVxZxUPnCJA7l2mCWNIpG9mGCD8wGNIcPD7Txa" crossorigin="anonymous"></script><!-- Font Awesome icons --><link href="https://maxcdn.bootstrapcdn.com/font-awesome/4.6.3/css/font-awesome.min.css" rel="stylesheet" integrity="sha384-T8Gy5hrqNKT+hzMclPo118YTQO6cYprQmhrYwIiQ/3axmI1hQomh7Ud2hPOy8SP1" crossorigin="anonymous">
<!-- clipboard.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/1.7.1/clipboard.min.js" integrity="sha384-cV+rhyOuRHc9Ub/91rihWcGmMmCXDeksTtCihMupQHSsi8GIIRDG0ThDc3HGQFJ3" crossorigin="anonymous"></script><!-- sticky kit --><script src="https://cdnjs.cloudflare.com/ajax/libs/sticky-kit/1.1.3/sticky-kit.min.js" integrity="sha256-c4Rlo1ZozqTPE2RLuvbusY3+SU1pQaJC0TjuhygMipw=" crossorigin="anonymous"></script><!-- pkgdown --><link href="../pkgdown.css" rel="stylesheet">
<script src="../pkgdown.js"></script><meta property="og:title" content="Combined Regression">
<script src="../pkgdown.js"></script><meta property="og:title" content="Multivariate Elastic Net">
<meta property="og:description" content="">
<meta name="twitter:card" content="summary">
<!-- mathjax --><script src="https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script><!--[if lt IE 9]>
......@@ -28,7 +28,7 @@
<span class="icon-bar"></span>
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">cornet</a>
<a class="navbar-link" href="../index.html">mixnet</a>
<span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.0.1</span>
</span>
</div>
......@@ -50,13 +50,13 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/rauschenberger/cornet">
<a href="https://github.com/rauschenberger/stanet">
<span class="fa fa-github"></span>
</a>
</li>
<li>
<a href="https://cran.r-project.org/package=cornet">
<a href="https://cran.r-project.org/package=stanet">
<span class="fa fa-download"></span>
</a>
......@@ -73,10 +73,10 @@
</header><div class="row">
<div class="col-md-9 contents">
<div class="page-header toc-ignore">
<h1>Combined Regression</h1>
<h1>Multivariate Elastic Net</h1>
<small class="dont-index">Source: <a href="https://github.com/rauschenberger/cornet/blob/master/vignettes/vignette.Rmd"><code>vignettes/vignette.Rmd</code></a></small>
<small class="dont-index">Source: <a href="https://github.com/rauschenberger/stanet/blob/master/vignettes/vignette.Rmd"><code>vignettes/vignette.Rmd</code></a></small>
<div class="hidden name"><code>vignette.Rmd</code></div>
</div>
......@@ -86,12 +86,12 @@
<div id="installation" class="section level2">
<h2 class="hasAnchor">
<a href="#installation" class="anchor"></a>Installation</h2>
<p>Install the current release from <a href="https://CRAN.R-project.org/package=cornet">CRAN</a>:</p>
<div class="sourceCode" id="cb1"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb1-1" title="1"><span class="kw">install.packages</span>(<span class="st">"cornet"</span>)</a></code></pre></div>
<p>or the latest development version from <a href="https://github.com/rauschenberger/cornet">GitHub</a>:</p>
<p>Install the current release from <a href="https://CRAN.R-project.org/package=mixnet">CRAN</a>:</p>
<div class="sourceCode" id="cb1"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb1-1" title="1"><span class="kw">install.packages</span>(<span class="st">"mixnet"</span>)</a></code></pre></div>
<p>or the latest development version from <a href="https://github.com/rauschenberger/mixnet">GitHub</a>:</p>
<div class="sourceCode" id="cb2"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb2-1" title="1"><span class="co">#install.packages("devtools")</span></a>
<a class="sourceLine" id="cb2-2" title="2">devtools<span class="op">::</span><span class="kw"><a href="http://www.rdocumentation.org/packages/devtools/topics/reexports">install_github</a></span>(<span class="st">"rauschenberger/cornet"</span>)</a></code></pre></div>
<p>Armin Rauschenberger and Enrico Glaab (2019). “Lasso and ridge regression for dichotomised outcomes”. <em>Manuscript in preparation.</em></p>
<a class="sourceLine" id="cb2-2" title="2">devtools<span class="op">::</span><span class="kw"><a href="http://www.rdocumentation.org/packages/devtools/topics/reexports">install_github</a></span>(<span class="st">"rauschenberger/mixnet"</span>)</a></code></pre></div>
<p>Armin Rauschenberger and Enrico Glaab (2019). “Improved elastic net regression through stacked generalisation”. <em>Manuscript in preparation.</em></p>
</div>
</div>
......
......@@ -6,7 +6,7 @@
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>Authors • cornet</title>
<title>Authors • mixnet</title>
<!-- jquery -->
<script src="https://code.jquery.com/jquery-3.1.0.min.js" integrity="sha384-nrOSfDHtoPMzJHjVTdCopGqIqeYETSXhZDFyniQ8ZHcVy08QesyHcnOUpMpqnmWq" crossorigin="anonymous"></script>
......@@ -57,7 +57,7 @@
<span class="icon-bar"></span>
</button>
<span class="navbar-brand">
<a class="navbar-link" href="index.html">cornet</a>
<a class="navbar-link" href="index.html">mixnet</a>
<span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.0.1</span>
</span>
</div>
......@@ -80,13 +80,13 @@
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/rauschenberger/cornet">
<a href="https://github.com/rauschenberger/stanet">
<span class="fa fa-github"></span>
</a>
</li>
<li>
<a href="https://cran.r-project.org/package=cornet">
<a href="https://cran.r-project.org/package=stanet">
<span class="fa fa-download"></span>
</a>
......
......@@ -5,12 +5,12 @@
<meta charset="utf-8">
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>Elastic Net with Dichotomised Outcomes • cornet</title>
<title>Multivariate Regression • mixnet</title>
<!-- jquery --><script src="https://code.jquery.com/jquery-3.1.0.min.js" integrity="sha384-nrOSfDHtoPMzJHjVTdCopGqIqeYETSXhZDFyniQ8ZHcVy08QesyHcnOUpMpqnmWq" crossorigin="anonymous"></script><!-- Bootstrap --><link href="https://maxcdn.bootstrapcdn.com/bootswatch/3.3.7/spacelab/bootstrap.min.css" rel="stylesheet" crossorigin="anonymous">
<script src="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.7/js/bootstrap.min.js" integrity="sha384-Tc5IQib027qvyjSMfHjOMaLkfuWVxZxUPnCJA7l2mCWNIpG9mGCD8wGNIcPD7Txa" crossorigin="anonymous"></script><!-- Font Awesome icons --><link href="https://maxcdn.bootstrapcdn.com/font-awesome/4.6.3/css/font-awesome.min.css" rel="stylesheet" integrity="sha384-T8Gy5hrqNKT+hzMclPo118YTQO6cYprQmhrYwIiQ/3axmI1hQomh7Ud2hPOy8SP1" crossorigin="anonymous">
<!-- clipboard.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/1.7.1/clipboard.min.js" integrity="sha384-cV+rhyOuRHc9Ub/91rihWcGmMmCXDeksTtCihMupQHSsi8GIIRDG0ThDc3HGQFJ3" crossorigin="anonymous"></script><!-- sticky kit --><script src="https://cdnjs.cloudflare.com/ajax/libs/sticky-kit/1.1.3/sticky-kit.min.js" integrity="sha256-c4Rlo1ZozqTPE2RLuvbusY3+SU1pQaJC0TjuhygMipw=" crossorigin="anonymous"></script><!-- pkgdown --><link href="pkgdown.css" rel="stylesheet">
<script src="pkgdown.js"></script><meta property="og:title" content="Elastic Net with Dichotomised Outcomes">
<meta property="og:description" content="Implements lasso and ridge regression for dichotomised outcomes (Rauschenberger et al. 2019). Such outcomes are not naturally but artificially binary. They indicate whether an underlying measurement is greater than a threshold.">
<script src="pkgdown.js"></script><meta property="og:title" content="Multivariate Regression">
<meta property="og:description" content="Implements high-dimensional multivariate regression by stacking (Rauschenberger et al. 2019).">
<meta name="twitter:card" content="summary">
<!-- mathjax --><script src="https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script><!--[if lt IE 9]>
<script src="https://oss.maxcdn.com/html5shiv/3.7.3/html5shiv.min.js"></script>
......@@ -28,7 +28,7 @@
<span class="icon-bar"></span>
</button>
<span class="navbar-brand">
<a class="navbar-link" href="index.html">cornet</a>
<a class="navbar-link" href="index.html">mixnet</a>
<span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.0.1</span>
</span>
</div>
......@@ -50,13 +50,13 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/rauschenberger/cornet">
<a href="https://github.com/rauschenberger/stanet">
<span class="fa fa-github"></span>
</a>
</li>
<li>
<a href="https://cran.r-project.org/package=cornet">
<a href="https://cran.r-project.org/package=stanet">
<span class="fa fa-download"></span>
</a>
......@@ -81,21 +81,21 @@
<div id="scope" class="section level2">
<h2 class="hasAnchor">
<a href="#scope" class="anchor"></a>Scope</h2>
<p>Lasso and ridge regression for dichotomised outcomes (extending <a href="https://CRAN.R-project.org/package=glmnet">glmnet</a>).</p>
<p>Stacked Elastic Net Regression (extending <a href="https://CRAN.R-project.org/package=glmnet">glmnet</a>).</p>
</div>
<div id="installation" class="section level2">
<h2 class="hasAnchor">
<a href="#installation" class="anchor"></a>Installation</h2>
<p>Install the current release from <a href="https://CRAN.R-project.org/package=cornet">CRAN</a>:</p>
<div class="sourceCode" id="cb1"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb1-1" title="1"><span class="kw">install.packages</span>(<span class="st">"cornet"</span>)</a></code></pre></div>
<p>or the latest development version from <a href="https://github.com/rauschenberger/cornet">GitHub</a>:</p>
<p>Install the current release from <a href="https://CRAN.R-project.org/package=stanet">CRAN</a>:</p>
<div class="sourceCode" id="cb1"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb1-1" title="1"><span class="kw">install.packages</span>(<span class="st">"stanet"</span>)</a></code></pre></div>
<p>or the latest development version from <a href="https://github.com/rauschenberger/stanet">GitHub</a>:</p>
<div class="sourceCode" id="cb2"><pre class="sourceCode r"><code class="sourceCode r"><a class="sourceLine" id="cb2-1" title="1"><span class="co">#install.packages("devtools")</span></a>
<a class="sourceLine" id="cb2-2" title="2">devtools<span class="op">::</span><span class="kw"><a href="http://www.rdocumentation.org/packages/devtools/topics/reexports">install_github</a></span>(<span class="st">"rauschenberger/cornet"</span>)</a></code></pre></div>
<a class="sourceLine" id="cb2-2" title="2">devtools<span class="op">::</span><span class="kw"><a href="http://www.rdocumentation.org/packages/devtools/topics/reexports">install_github</a></span>(<span class="st">"rauschenberger/stanet"</span>)</a></code></pre></div>
</div>
<div id="reference" class="section level2">
<h2 class="hasAnchor">
<a href="#reference" class="anchor"></a>Reference</h2>
<p>Armin Rauschenberger and Enrico Glaab (2019). “Lasso and ridge regression for dichotomised outcomes”. <em>Manuscript in preparation.</em></p>
<p><em>Manuscript in preparation.</em></p>
</div>
</div>
......@@ -103,11 +103,13 @@
<div class="links">
<h2>Links</h2>
<ul class="list-unstyled">
<li>Browse source code at <br><a href="https://github.com/rauschenberger/cornet">https://​github.com/​rauschenberger/​cornet</a>
<li>Download from CRAN at <br><a href="https://cloud.r-project.org/package=mixnet">https://​cloud.r-project.org/​package=mixnet</a>
</li>
<li>Report a bug at <br><a href="https://github.com/rauschenberger/cornet/issues">https://​github.com/​rauschenberger/​cornet/​issues</a>
<li>Browse source code at <br><a href="https://github.com/rauschenberger/stanet">https://​github.com/​rauschenberger/​stanet</a>
</li>
<li>Download package at <br><a href="https://github.com/rauschenberger/cornet">https://​github.com/​rauschenberger/​cornet</a>
<li>Report a bug at <br><a href="https://github.com/rauschenberger/stanet/issues">https://​github.com/​rauschenberger/​stanet/​issues</a>
</li>
<li>Download package at <br><a href="https://github.com/rauschenberger/stanet">https://​github.com/​rauschenberger/​stanet</a>
</li>
</ul>
</div>
......@@ -128,9 +130,9 @@
<div class="dev-status">
<h2>Dev status</h2>
<ul class="list-unstyled">
<li><a href="https://travis-ci.org/rauschenberger/cornet"><img src="https://travis-ci.org/rauschenberger/cornet.svg" alt="Travis-CI Build Status"></a></li>
<li><a href="https://ci.appveyor.com/project/rauschenberger/cornet"><img src="https://ci.appveyor.com/api/projects/status/github/rauschenberger/cornet?svg=true" alt="AppVeyor build status"></a></li>
<li><a href="https://codecov.io/github/rauschenberger/cornet"><img src="https://codecov.io/github/rauschenberger/cornet/coverage.svg?branch=master" alt="Coverage Status"></a></li>
<li><a href="https://travis-ci.org/rauschenberger/stanet"><img src="https://travis-ci.org/rauschenberger/stanet.svg" alt="Travis-CI Build Status"></a></li>
<li><a href="https://ci.appveyor.com/project/rauschenberger/stanet"><img src="https://ci.appveyor.com/api/projects/status/github/rauschenberger/stanet?svg=true" alt="AppVeyor build status"></a></li>
<li><a href="https://codecov.io/github/rauschenberger/stanet"><img src="https://codecov.io/github/rauschenberger/stanet/coverage.svg?branch=master" alt="Coverage Status"></a></li>
</ul>
</div>
</div>
......
......@@ -6,7 +6,7 @@
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>Changelog • cornet</title>
<title>Changelog • mixnet</title>
<!-- jquery -->
<script src="https://code.jquery.com/jquery-3.1.0.min.js" integrity="sha384-nrOSfDHtoPMzJHjVTdCopGqIqeYETSXhZDFyniQ8ZHcVy08QesyHcnOUpMpqnmWq" crossorigin="anonymous"></script>
......@@ -57,7 +57,7 @@
<span class="icon-bar"></span>
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">cornet</a>
<a class="navbar-link" href="../index.html">mixnet</a>
<span class="label label-default" data-toggle="tooltip" data-placement="bottom" title="Released package">0.0.1</span>
</span>
</div>
......@@ -80,13 +80,13 @@
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/rauschenberger/cornet">
<a href="https://github.com/rauschenberger/stanet">
<span class="fa fa-github"></span>
</a>
</li>
<li>
<a href="https://cran.r-project.org/package=cornet">
<a href="https://cran.r-project.org/package=stanet">
<span class="fa fa-download"></span>
</a>
......@@ -104,12 +104,12 @@
<div class="col-md-9 contents">
<div class="page-header">
<h1>Changelog <small></small></h1>
<small>Source: <a href='https://github.com/rauschenberger/cornet/blob/master/NEWS.md'><code>NEWS.md</code></a></small>
<small>Source: <a href='https://github.com/rauschenberger/stanet/blob/master/NEWS.md'><code>NEWS.md</code></a></small>
</div>
<div id="cornet-001-2019-03-15" class="section level2">
<div id="mixnet-001-2019-06-01" class="section level2">
<h2 class="hasAnchor">
<a href="#cornet-001-2019-03-15" class="anchor"></a>cornet 0.0.1 (2019-03-15)</h2>
<a href="#mixnet-001-2019-06-01" class="anchor"></a>mixnet 0.0.1 (2019-06-01)</h2>
<ul>
<li>first submission</li>
</ul>
......@@ -120,7 +120,7 @@
<div id="tocnav">
<h2>Contents</h2>
<ul class="nav nav-pills nav-stacked">
<li><a href="#cornet-001-2019-03-15">0.0.1</a></li>
<li><a href="#mixnet-001-2019-06-01">0.0.1</a></li>
</ul>
</div>
</div>
......
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