diff --git a/2021/2021-04-20_IT101-DM/slides/code_versioning.md b/2021/2021-04-20_IT101-DM/slides/code_versioning.md
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+# Code versioning
+<div style="position:absolute; width:40%">
+
+**git**
+
+ * Current standard for code versioning
+ * Maintain versions of your code as it develops
+ * Local system, which does not require an online repository
+ * Repositories allow distributed development
+
+<img align="middle" height="300px" src="slides/img/Git-logo.png">
+</div>
+
+<div class="fragment" style="position:absolute; left:50%; width:40%"">
+
+**git@lcsb**
+* Recommended, supported repository
+* Allows tracking of issues
+* Ready for continous integration - code checked on commits to the repository.
+* [https://git-r3lab.uni.lu](https://git-r3lab.uni.lu)
+
+
+ **Use at LCSB**
+
+ * All analyses code should be in a repository
+ * Minimally at submission of a manuscript
+ * Better daily
+ * Even better "analyses chunkwise"
+</div>
+
+<div style="position:absolute; width:45%; left:50%; top:28em; text-align:right">
+<a href="https://howto.lcsb.uni.lu/?policies:LCSB-POL-BIC-07" style="color:grey; font-size:0.8em;">LCSB-POL-BIC-07 Source Code Management Policy</a>
+</div>
diff --git a/2021/2021-04-20_IT101-DM/slides/data-housekeeping.md b/2021/2021-04-20_IT101-DM/slides/data-housekeeping.md
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+# Data housekeeping
+## File names
+<div style="display:flex; position:static; width:100%">
+<div class="fragment" data-fragment-index="0" style="position:static; width:30%">
+
+### General pricinples
+ * Machine readable
+ * Human readable
+ * Plays well with default ordering
+</div>
+<div class="fragment" data-fragment-index="1" style="position:absolute; left:33%; width:30%">
+
+### Separators
+ * No spaces
+ * Underscore to separate
+ * Hyphen to combine
+
+</div>
+<div class="fragment" data-fragment-index="2" style="position:absolute; left:66%; width:30%">
+
+### Date format follows **ISO 8601**<br>
+
+ 2018-12-03<br>
+ 2018-12-06_1700
+
+</div>
+</div>
+
+
+<div class="fragment" data-fragment-index="3" style="width:100%; position:static">
+<div style="position:absolute;width:55%">
+<b>Bad</b> names
+
+```bash
+ PhD-project-Jan19 alldata_final.foo
+ Finacial detailes BIocore 19/11/12.xls
+ ATACseq1Londonmapped.bam
+ Hlad.jez.M-L-průtoky JÃObj.z OhÅ™e-od 10-2011.xlsx
+```
+</div>
+<div style="position:relative;width:55%; bottom:20%; left:50%">
+<b>Good</b> names
+
+```bash
+Iris-setosa_samples_1927-05-12.csv
+PI102_Mouse12_EEG_2018-11-03_1245.tsv
+Bioinfiniti_FullProposal_2018-11-15_1655.do
+```
+</div>
+</div>
+<br>
+<br>
+<div class="fragment" data-fragment-index="3" style="width:100%;">
+From Jenny Bryan by CC-BY
+(https://speakerdeck.com/jennybc/how-to-name-files)
+</div>
+
+
+
+# Data housekeeping
+## File organization
+* Have folder organization conventions for your **group**
+ * Per Paper
+ * Per Study/Project
+ * Per Collaborator
+* Keep <b>readme files</b> for data
+ * Title
+ * Date of Creation/Receipt
+ * Instrument or software specific information
+ * People involved
+ * Relations between multiple files/folders
+
+* Separate files you are actively working from the old ones
+* Orient newcomers to the group's conventions
+
+
+
+# Data housekeeping
+<div style="position:absolute">
+
+## When working
+ * Clarify and separate source and intermediate data
+ * Keep data copies to a **minimum**
+ * Cleanup post-analysis
+ * Cleanup copies created for presentations or for sharing
+</div>
+<div style="position:relative;left:50%; width:40%">
+<img src="slides/img/cleaning-table.jpg" height="450px">
+</div>
+
+
+
+# Data housekeeping
+## End of project
+ * handover data to a new responsible when leaving
+ * data should be kept as a single copy on server-side storage
+ * no copies on desktops and external devices
+ * non-proprietary formats
+ * minimal metadata
+ * sensitive data (e.g. whole genome) **must** be encrypted
+ <br/>
+ <br/>
+ * If not specified otherwise, data must be kept for **10 years** following project end for reproducibility purposes
+<aside class="notes">
+Note: sometimes it is hard to find/understand dataset 10 days old
+</aside>
+
+## In doubt on data archival?
+Contact R<sup>3</sup> for support on archival of datasets using tickets:
+ * https://service.uni.lu/sp
+ * Home > Catalog > LCSB > Biocore: Application services > Request for: Support
+
+<div style="position:absolute; width:45%; left:50%; top:28em; text-align:right">
+<a href=" https://howto.lcsb.uni.lu/?policies:LCSB-POL-BIC-03" style="color:grey; font-size:0.8em;">Research Data Retention and Archival Policy</a>
+</div>
+
+
+
+# Data housekeeping - Summary
+## Server is your friend!
+ * Allows a consistent backup policy for your datasets
+ * Keeps number of copies to minimum
+ * Specification of clear access rights
+ * High accessibility
+ * Data are discoverable
+ * Server can't be stolen
+
+## General guidelines
+ * Use institutional media for storage of **all** data
+ * Research data (particularly sensitive data) should be in a single source location
+ * Enable encryption for data stored on movable media
+ * Clarify and separate source and intermediate data
+ * Disable write access to relevant source data (read-only)
+ * Backup research data!
+ * Download Anti-virus software
+ * Generate checksums
diff --git a/2021/2021-04-20_IT101-DM/slides/data-introduction.md b/2021/2021-04-20_IT101-DM/slides/data-introduction.md
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+# Data and metadata
+<div style="display:grid;grid-gap:100px;grid-template-columns: 40% 40%">
+<div >
+
+## Data
+ * "*information in digital form that can be transmitted or processed*"
+ <p align="right">-- Merriam-Webster dictionary</p>
+ * "*information in an electronic form that can be stored and processed by a computer*"
+ <p align="right">--Cambridge dictionary</p>
+
+</div>
+<div>
+
+## Metadata
+ * data describing other data
+ * information that is given to describe or help you use other information
+ * metadata are data
+ * can be processed and analyzed
+</div>
+</div>
+
+<div class="fragment">
+
+## Metadata examples:
+<div style="position:absolute">
+ <ul>
+ <li> LabBook </li>
+ <li> author/owner of the data</li>
+ <li> origin of the data
+ <li> data type
+ </ul>
+</div>
+<div style="position:absolute;left:25%">
+ <ul>
+ <li> description of content </li>
+ <li> modification date </li>
+ <li> description of modification </li>
+ <li> location </li>
+ </ul>
+</div>
+<div style="position:relative;left:50%;top:0.7em">
+ <ul>
+ <li> calibration readings</li>
+ <li> software/firmware version</li>
+ <li> data purpose</li>
+ <li> means of creation</li>
+ </ul>
+</div>
+</div>
+
+<div class="fragment">
+<br>
+</center>
+<center style="color:red">!Insufficient metadata make the data useless!</center>
+</div>
+<aside class="notes">
+Sometimes metadata collection takes more time than data collection
+</aside>
+
+
+
+# LCSB research data
+three categories:
+ * **Primary data**
+ * scientific data
+ * measurements, images, observations, notes, surveys, ...
+ * models, software codes, libraries, ...
+ * metadata directly describing the data
+ * data dictionaries
+ * format, version, coverage descriptions, ...
+
+ * **Research record**
+ * description of the research process, including experiment
+ * experiment set-up
+ * followed protocols
+ * ...
+
+ * **Project accompanying documentation**
+ * ethical approvals, information on the consent
+ * collaboration agreements
+ * intellectual property ownership
+ * other relevant documentation
+
+<div style="position:absolute; width:45%; left:50%; top:28em; text-align:right;">
+<a href="https://howto.lcsb.uni.lu/internal/policies/LCSB-POL-BIC-03/" style="color:grey; font-size:0.8em;">LCSB-POL-BIC-03 Research Data Retention and Archival Policy</a>
+</div>
\ No newline at end of file
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+# Typical flow of data
+
+<div style="display:grid;grid-gap:10px;grid-template-columns: 30% 20% 30%;
+ grid-auto-flow:column;grid-template-rows: repeat(4,auto);position:relative;left:8%">
+
+<div class="content-box fragment" data-fragment-index="1">
+ <div class="box-title red">Source data</div>
+ <div class="content">
+
+ * Experimental results
+ * Large data sets
+ * Manually collected data
+ * External
+
+ </div>
+</div>
+
+<div class="content-box fragment" data-fragment-index="2">
+ <div class="box-title yellow">Intermediate</div>
+ <div class="content">
+
+ * Derived data
+ * Tidy data
+ * Curated sets
+
+ </div>
+</div>
+
+<div class="content-box fragment" data-fragment-index="3">
+ <div class="box-title blue">Analyses</div>
+ <div class="content">
+
+ * Exploratory
+ * Model building
+ * Hypothesis testing
+
+ </div>
+</div>
+
+<div class="content-box fragment" data-fragment-index="4">
+ <div class="box-title green">Dissemination</div>
+ <div class="content">
+
+ * Manuscript, report, presentation, ...
+
+ </div>
+</div>
+<center>
+<img src="slides/img/data-flow_sources.png" height=60%>
+</center>
+<center>
+<img src="slides/img/data-flow_transformation.png" height=60%>
+</center>
+<center>
+<img src="slides/img/data-flow_chart.png" height=60%>
+</center>
+<center>
+<img src="slides/img/data-flow_paper.png" height=60%>
+</center>
+
+<div class="content-box fragment" data-fragment-index="5">
+<div class="box-title red">Preserve</div>
+ <div class="content">
+
+ * Version data sets
+ * Backup
+ * Protect
+
+ </div>
+</div>
+
+<div class="content-box fragment" data-fragment-index="6">
+ <div class="box-title yellow">Reproduce</div>
+ <div class="content">
+
+ * Automate your builds
+ * Use workflow tools (e.g. Snakemake)
+
+ </div>
+</div>
+
+
+<div class="content-box fragment" data-fragment-index="7">
+<div class="box-title blue">Trace</div>
+ <div class="content">
+
+ * Multiple iterations.
+ * Code versioning (Git)
+
+ </div>
+</div>
+
+<div class="content-box fragment" data-fragment-index="8">
+<div class="box-title green">Track</div>
+ <div class="content">
+
+ * Through multiple versions
+
+ </div>
+</div>
+
+</div>
+<aside class="notes">
+flow of the data is downstream (mostly), but you are going back and forth
+applies to all data (financial report, lab safety assessment)
+</aside>
diff --git a/2021/2021-04-20_IT101-DM/slides/fair-principles.md b/2021/2021-04-20_IT101-DM/slides/fair-principles.md
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+# FAIR (meta)data principles
+ * dates back to 2014
+ * well accepted by scientific community
+ * necessity in data driven science
+ * officially embraced by EU and G20
+ * required by funding agencies and journal publishers
+
+<center>
+<img src="slides/img/fair-principles.png" height="400px">
+</center>
+<br>
+<br>
diff --git a/2021/2021-04-20_IT101-DM/slides/howtos.md b/2021/2021-04-20_IT101-DM/slides/howtos.md
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+# LCSB How-Tos
+<br>
+https://howto.lcsb.uni.lu/
+<center>
+ <img src="slides/img/howtocard.png" width="50%">
+</center>
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new file mode 120000
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--- /dev/null
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new file mode 120000
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--- /dev/null
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+../../../../2020/2020-06-09_IT101-DM/slides/img/reproducibility_nature.png
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+../../../../2020/2020-06-09_IT101-DM/slides/img/wordcloud.png
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diff --git a/2021/2021-04-20_IT101-DM/slides/index.md b/2021/2021-04-20_IT101-DM/slides/index.md
new file mode 100644
index 0000000000000000000000000000000000000000..987e37711c5525d92252eaf51cdba8c03f89466c
--- /dev/null
+++ b/2021/2021-04-20_IT101-DM/slides/index.md
@@ -0,0 +1,20 @@
+# IT101 - Working with computers
+<br>IT101 - Working with computers<br>
+## April 20th, 2021
+
+<div style="top: 6em; left: 0%; position: absolute;">
+ <img src="theme/img/lcsb_bg.png">
+</div>
+
+<div style="top: 5em; left: 60%; position: absolute;">
+ <img src="slides/img/r3-training-logo.png" height="200px">
+ <br><br><br><br>
+ <h3></h3>
+ <br><br><br>
+ <h4>
+ Vilem Ded<br>
+ Data Steward<br>
+ vilem.ded@uni.lu<br>
+ <i>Luxembourg Centre for Systems Biomedicine</i>
+ </h4>
+</div>
diff --git a/2021/2021-04-20_IT101-DM/slides/ingestion.md b/2021/2021-04-20_IT101-DM/slides/ingestion.md
new file mode 100644
index 0000000000000000000000000000000000000000..7d168db8c9e03e261196b436ccae1b460f49fc4e
--- /dev/null
+++ b/2021/2021-04-20_IT101-DM/slides/ingestion.md
@@ -0,0 +1,79 @@
+# Data housekeeping
+## Available data storage
+<div class='fragment' style="position:absolute">
+<img src="slides/img/LCSB_storages_full.png" height="750px">
+</div>
+
+<div class='fragment' style="position:absolute">
+<img src="slides/img/LCSB_storages_personal-crossed.png" height="750px">
+</div>
+
+<div style="position:absolute; width:45%; left:50%; top:28em; text-align:right">
+<a href=" https://howto.lcsb.uni.lu/?policies:LCSB-POL-BIC-02" style="color:grey; font-size:0.8em;">Data Storage and Backup Policy</a>
+</div>
+
+
+
+# Data ingestion/transfer
+## Receiving and sending data
+
+<img height="400px" style="position:relative;left:10%" src="slides/img/banned_exchange_channels.png"><br>
+<div style="position:absolute; left:10%;width:30%">
+
+## E-mail is not for data transfer
+
+* Avoid transfer of any data by e-mail
+* E-mail is a poor repository
+* Data can be read on passage
+
+</div>
+<div class="fragment" style="left:50%; width:30%; position:absolute">
+
+## Exchanging data
+* Share on Atlas server
+* OwnCloud share (LCSB - BioCore)
+* DropIt service (SIU)
+* LFT (IBM Aspera) share for sensitive data
+</div>
+</div>
+
+<div style="position:absolute; width:45%; left:50%; top:28em; text-align:right">
+<a href=" https://howto.lcsb.uni.lu/?policies:LCSB-POL-BIC-05" style="color:grey; font-size:0.8em;">Research Human Data Sharing Policy</a>
+</div>
+
+
+
+# Data ingestion/transfer
+Data can be corrupted:
+ * (non-)malicious modification
+ * faulty file transfer
+ * disk corruption
+
+<div class="fragment">
+
+### Solution
+
+ * disable write access to the source data
+ * generate checksums!
+
+<div style="position:absolute;left:40%">
+<img src="slides/img/checksum.png" width="500px">
+</div>
+</div>
+
+<div class="fragment" style="position:relative; left:0%">
+
+
+## When to generate checksums?
+* before data transfer
+ - new dataset from collaborator
+ - upload to remote repository
+
+* long term storage
+ - master version of dataset
+ - snapshot of data for publication
+</div>
+
+<div style="position:absolute; width:45%; left:50%; top:28em; text-align:right">
+<a href=" https://howto.lcsb.uni.lu/?policies:LCSB-POL-BIC-02" style="color:grey; font-size:0.8em;">Data Storage and Backup Policy</a>
+</div>
diff --git a/2021/2021-04-20_IT101-DM/slides/introduction.md b/2021/2021-04-20_IT101-DM/slides/introduction.md
new file mode 100644
index 0000000000000000000000000000000000000000..95e30815a03c5be0f1dd409701ec0edc15d2aa73
--- /dev/null
+++ b/2021/2021-04-20_IT101-DM/slides/introduction.md
@@ -0,0 +1,26 @@
+# Introduction
+<div class="fragment" style="position:absolute">
+<img height="450px" src="slides/img/wordcloud.png"><br>
+
+## Learning objectives
+
+ * How to manage your data
+ * How to look and analyze your data
+ * Solving issues with computers
+ * Reproduciblity in the research data life cycle
+
+</div>
+<div class="fragment" style="position:relative;left:50%; width:40%">
+<div >
+<center>
+<img height="405px" src="slides/img/rudi_balling.jpg"><br>
+Prof. Dr. Rudi Balling, director
+</center>
+</div>
+
+## Pertains to practically all people at LCSB
+ * Scientists
+ * PhD candidates
+ * Technicians
+ * Administrators
+</div>
diff --git a/2021/2021-04-20_IT101-DM/slides/list.json b/2021/2021-04-20_IT101-DM/slides/list.json
new file mode 100644
index 0000000000000000000000000000000000000000..5dbc2360d7b5b8d68580868e6431ce26e8746eb1
--- /dev/null
+++ b/2021/2021-04-20_IT101-DM/slides/list.json
@@ -0,0 +1,17 @@
+[
+ {"filename": "index.md"},
+ {"filename": "introduction.md"},
+ {"filename": "data-introduction.md"},
+ {"filename": "data_flow.md"},
+ {"filename": "ingestion.md"},
+ {"filename": "storage_setup.md"},
+ {"filename": "data-housekeeping.md"},
+ {"filename": "howtos.md"},
+ {"filename": "reproducibility.md"},
+ {"filename": "code_versioning.md"},
+ {"filename": "visualization.md"},
+ {"filename": "problem_solving.md"},
+ {"filename": "fair-principles.md"},
+ {"filename": "r3_group.md"},
+ {"filename": "thanks.md"}
+]
diff --git a/2021/2021-04-20_IT101-DM/slides/overview.md b/2021/2021-04-20_IT101-DM/slides/overview.md
new file mode 100644
index 0000000000000000000000000000000000000000..6f9143c7c64fa539eb44c3ea5ff9eec076701879
--- /dev/null
+++ b/2021/2021-04-20_IT101-DM/slides/overview.md
@@ -0,0 +1,25 @@
+## Overview
+
+0. Introduction - learning objectives + targeted audience
+1. Data workflow
+1. Ingestion:
+ * receiving/sending/sharing data
+ * file naming
+ * checksums
+ * backup
+ 1. making data tidy
+ * what is table
+ *
+ 1. Learning to code workflows and analyses - excel files, coding
+ 1. Code versioning and reproducibility
+ 1. Visualization
+ * see the data
+ 1. problem solving
+ * guide
+ * rubberducking
+ * google for help
+ * oracle
+ 1. R3 team
+ 1. Acknowledgment
+
+ 1. data minimization
diff --git a/2021/2021-04-20_IT101-DM/slides/problem_solving.md b/2021/2021-04-20_IT101-DM/slides/problem_solving.md
new file mode 100644
index 0000000000000000000000000000000000000000..904240dd79feb49dddb92bb2865fb35460ff1b71
--- /dev/null
+++ b/2021/2021-04-20_IT101-DM/slides/problem_solving.md
@@ -0,0 +1,11 @@
+# Problem solving
+A guide for solving computing issues
+
+1. Express the problem
+ * Write down what you want to achieve
+2. Search for help
+ * Read **FAQs**, **help pages** and the **official documentation** well before turning to Google
+ * Use stack exchange, forums and related resources (carefully)
+3. Ask an expert
+ * You have to submit the problem in writing
+ * Make the question interesting
diff --git a/2021/2021-04-20_IT101-DM/slides/r3_group.md b/2021/2021-04-20_IT101-DM/slides/r3_group.md
new file mode 100644
index 0000000000000000000000000000000000000000..919aa4839ccb71bb9570fdfece3a0041ee1bfd29
--- /dev/null
+++ b/2021/2021-04-20_IT101-DM/slides/r3_group.md
@@ -0,0 +1,140 @@
+# Responsible and Reproducible Research (R<sup>3</sup>)
+## What is R<sup>3</sup>?
+
+
+A multi-facetted change management
+process built on 3 pillars:
+
+- R3 pathfinder
+
+- R3 school
+
+- R3 accelerator
+
+Common link module: R3 clinic
+
+<div style="top: -1em; left: 50%; position: absolute;">
+ <img src="slides/img/3pillars-full.png">
+</div>
+
+<br>
+<br>
+<br>
+<br>
+
+<aside class="notes">
+Pathfinder - policies, finding optimal data management changes<br>
+School - courses, howtos, trainnings<br>
+Accelerator - advanced teams and their boost/support, CI/CD setup<br>
+Clinic - hands-on, meetings in groups, code review + suggestions<br>
+</aside>
+
+## R<sup>3</sup> Training
+ * LCSB's Monthly Data Management and Data Protection training
+ * ELIXIR Luxembourg's trainings <br>
+ https://elixir-luxembourg.org/training
+ * R<sup>3</sup> school Git basics - every 4 months
+ <aside class="notes">
+ Direct newcommers to this monthly training
+ </aside>
+
+
+
+# Responsible and Reproducible Research (R<sup>3</sup>)
+<section data-transition="none" data-background-image="slides/img/r3-training-logo.png" data-background-size="1000px" data-background-opacity="0.1">
+</section>
+<div style="display:block;text-align:center;position:relative;" >
+<div class="profile-container">
+
+ * Reinhard Schneider
+ * <img src="slides/img/R3_profile_pictures/reinhard_schneider.png">
+ * Head of Bioinformatics Core
+
+</div>
+<div class="profile-container">
+
+ * Pinar Alper
+ * <img src="slides/img/R3_profile_pictures/pinar_alper.png">
+ * Datasteward
+
+</div>
+<div class="profile-container">
+
+ * Yohan Yarosz</li>
+ * <img src="slides/img/R3_profile_pictures/yohan_yarosz.png">
+ * Development
+
+</div>
+<div class="profile-container">
+
+ * Laurent Heirendt</li>
+ * <img src="slides/img/R3_profile_pictures/laurent_heirendt.png">
+ * Git, CI
+
+</div>
+<div class="profile-container">
+
+ * Sarah Peter</li>
+ * <img src="slides/img/R3_profile_pictures/sarah_peter.png">
+ * Infrastructure
+
+</div>
+<div class="profile-container">
+
+ * Valentine Groues</li>
+ * <img src="slides/img/R3_profile_pictures/valentine_groues.png">
+ * Development
+
+</div>
+<div class="profile-container">
+
+ * Vilem Ded</li>
+ * <img src="slides/img/R3_profile_pictures/vilem_ded.png">
+ * Datasteward
+
+</div>
+<div class="profile-container">
+
+ * Noua Toukourou</li>
+ * <img src="slides/img/R3_profile_pictures/noua_toukourou.png">
+ * Infrastructure
+
+</div>
+<div class="profile-container">
+
+ * Alexey Kolodkin</li>
+ * <img src="slides/img/R3_profile_pictures/alexey_kolodkin.png">
+ * Datasteward
+
+</div>
+<div class="profile-container">
+
+ * Maharshi Vyas</li>
+ * <img src="slides/img/R3_profile_pictures/maharshi_vyas.png">
+ * Infrastructure
+
+</div>
+
+<div class="profile-container">
+
+ * Nene Barry</li>
+ * <img src="slides/img/R3_profile_pictures/nene_barry.png">
+ * Datasteward
+
+</div>
+
+<div class="profile-container">
+
+ * Karim Chaouch</li>
+ * <img src="slides/img/R3_profile_pictures/karim_chaouch.png">
+ * Development
+
+</div>
+<div class="profile-container">
+
+ * Christophe Trefois
+ * <img src="slides/img/R3_profile_pictures/christophe_trefois.png">
+ * R<sup>3</sup> team lead
+
+</div>
+</div>
diff --git a/2021/2021-04-20_IT101-DM/slides/reproducibility.md b/2021/2021-04-20_IT101-DM/slides/reproducibility.md
new file mode 100644
index 0000000000000000000000000000000000000000..a73310ceaf1031a2e79e0f55083319e52680f5cf
--- /dev/null
+++ b/2021/2021-04-20_IT101-DM/slides/reproducibility.md
@@ -0,0 +1,96 @@
+# Reproducibility
+* ensures credibility
+* key requirement for follow-up and collaborative studies
+
+<div style="position:absolute">
+<img src="slides/img/reproducibility_nature.png" height="650px">
+</div>
+
+<div class="fragment" style="position:relative;left:50%">
+
+## Why is our workflow not reproducible?
+
+ Lack of provenance:
+ * Input data downloaded from “some websiteâ€
+ * Copy & paste operations
+ * Manual text entry
+ * Analysis not coded
+ * Intermediate and final data not generated by deterministic processes
+</div>
+
+
+
+# Reproducibility
+## Learning to code workflows and analyses
+<div style="display:inline-grid;grid-gap: 40px;grid-template-columns: auto auto;position:relative;left:12%">
+<div class="fragment">
+<div class="content-box">
+<div class="box-title red">Spreadsheets alone</div>
+<div class="content">
+
+ * Is great for looking at data.
+ * Data entry is fast.
+ * Analysis flow is hidden and not in focus.
+
+</div>
+</div>
+<div style="text-align:center">
+<img src="slides/img/excel_data-sheet.png" height="280px">
+</div>
+</div>
+
+<div class="fragment">
+<div class="content-box">
+<div class="box-title">Coding</div>
+<div class="content">
+
+ * Is great for controlling analysis
+ * Data is hidden.
+ * Flow is visible.
+</div>
+</div>
+<img src="slides/img/code-example.png" height="280px">
+</div>
+</div>
+
+<div class="content-box fragment" style="left:15%;width:60%;position:relative">
+<div class="box-title green">Develop data science skills</div>
+<div class="content">
+
+ * Develop good data management and analysis habits.
+ * Start coding your analysis within spreadsheets.
+ * Make yourself familiar with a statistics environment such as R, Python or Matlab
+ * No need to learn a high level programming language such as C++ or Java.
+
+</div>
+</div>
+
+</div>
+
+
+
+# Table
+<div style="position:absolute">
+"Tabular format of data"
+
+### Header
+
+ * one line!
+ * **good** names of columns
+
+### Rows
+ * represent observations/entities
+
+### Columns
+ * represent property of the observations
+ * one data type
+</div>
+<div style="left:50%; position:relative; top:-2em">
+<img src="slides/img/excel_data-sheet.png" width="700px">
+<div class="fragment" data-fragment-index="3" style="position:absolute">
+<img src="slides/img/excel_analyses-sheet.jpeg" width="700px"><br>
+</div>
+<div class="fragment" data-fragment-index="4" style="position:relative">
+<img src="slides/img/red-cross.png" width="700px"><br>
+</div>
+</div>
diff --git a/2021/2021-04-20_IT101-DM/slides/storage_setup.md b/2021/2021-04-20_IT101-DM/slides/storage_setup.md
new file mode 100644
index 0000000000000000000000000000000000000000..c4f5e9070cec562fe4ecf14589be1a07c99c647f
--- /dev/null
+++ b/2021/2021-04-20_IT101-DM/slides/storage_setup.md
@@ -0,0 +1,54 @@
+# Storage set-up
+
+* Download Anti-virus software
+* Regularly update your SW/OS
+* Encrypt movable media
+
+### Passwords
+
+* Strong passwords
+* Password manager
+* Safe password exchange channels
+* Expiration time on password share
+
+### Backup
+ * take care of your own backups!
+ * don't work on your backup copy!
+ * minimum is <b>3-2-1 backup rule</b>
+
+
+<div style="position:absolute;right:10%;top:10%">
+<img src="slides/img/undraw_secure_server_s9u8.png" height="750px">
+</div>
+<div style="position:absolute; width:45%; left:50%; top:28em; text-align:right">
+<a href=" https://howto.lcsb.uni.lu/?policies:LCSB-POL-BIC-02" style="color:grey; font-size:0.8em;">Data Storage and Backup Policy</a>
+</div>
+
+
+
+# Storage set-up
+## Backup - Central IT/LCSB
+<div style="position:relative">
+<img src="slides/img/LCSB_storages_backed-up.png" height="750px">
+</div>
+<div style="position:absolute;left:65%;top:60%">
+
+Server administrators take care of:
+* server backups
+* LCSB OwnCloud backups
+* group/application server backups (not always)
+
+</div>
+
+
+
+# Storage set-up
+## Backup - personal research data
+<div style="position:relative">
+<img src="slides/img/LCSB_storages_backup.png" height="750px">
+</div>
+<div style="position:absolute;left:55%;top:70%">
+
+<font color="red">One version should reside on Atlas!</font>
+
+</div>
diff --git a/2021/2021-04-20_IT101-DM/slides/thanks.md b/2021/2021-04-20_IT101-DM/slides/thanks.md
new file mode 100644
index 0000000000000000000000000000000000000000..7852f522c4d40df3ff9c9346e8b79dffc1178b3a
--- /dev/null
+++ b/2021/2021-04-20_IT101-DM/slides/thanks.md
@@ -0,0 +1,42 @@
+# Thank you.<sup> </sup>
+<center><img src="slides/img/r3-training-logo.png" height="200px"></center>
+<br>
+<br>
+<br>
+<br>
+<center>
+Contact us if you need help:
+
+<a href="mailto:lcsb-r3@uni.lu">lcsb-r3@uni.lu</a>
+</center>
+<div style="position:absolute">
+Links:
+
+HowTo Cards / Policies: https://howto.lcsb.uni.lu/
+
+Course Slides: https://courses.lcsb.uni.lu/
+
+Internal Presentations: https://presentations.lcsb.uni.lu/
+
+LCSB GitLab: https://git-r3lab.uni.lu/
+
+HPC: https://hpc.uni.lu/
+
+Service Portal: https://service.uni.lu/sp
+
+LCSB intranet: https://intranet.uni.lux
+</div>
+<div style="position:relative;top:1.5em;left:55%;width:45%">
+Avalable SW and tools:
+<div style="margin-left: 20px;">
+SIU managed:
+
+  - Service Portal > All Catalogs > IT > Softwares
+</div>
+<div style="margin-left: 20px;">
+LCSB managed:
+
+  - Service Portal > Knowledge > FAQ - Corporate Software\
+  - LCSB intranet > Science tab > Tools
+</div>
+</div>
diff --git a/2021/2021-04-20_IT101-DM/slides/visualization.md b/2021/2021-04-20_IT101-DM/slides/visualization.md
new file mode 100644
index 0000000000000000000000000000000000000000..78847e73a297f77e3753623d7e546dcf499d4e2f
--- /dev/null
+++ b/2021/2021-04-20_IT101-DM/slides/visualization.md
@@ -0,0 +1,21 @@
+# Visualization
+<center>
+
+**Plot your data!**
+<figure>
+ <img src="slides/img/DinoSequentialSmaller.gif" height="500px">
+ <blockquote>"never trust summary statistics alone; always visualize your data"</blockquote>
+ <figcaption>--Alberto Cairo</figcaption>
+</figure>
+</center>
+
+
+
+# Visualization
+<center>
+
+**Plot your data!**
+<figure>
+ <img src="slides/img/plot-data.png" height="800px">
+</figure>
+</center>
diff --git a/2021/2021-06-08_IT101-DM/slides/code_versioning.md b/2021/2021-06-08_IT101-DM/slides/code_versioning.md
new file mode 120000
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@@ -0,0 +1 @@
+../../2021-04-20_IT101-DM/slides/code_versioning.md
\ No newline at end of file
diff --git a/2021/2021-06-08_IT101-DM/slides/data-housekeeping.md b/2021/2021-06-08_IT101-DM/slides/data-housekeeping.md
new file mode 120000
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@@ -0,0 +1 @@
+../../2021-04-20_IT101-DM/slides/data-housekeeping.md
\ No newline at end of file
diff --git a/2021/2021-06-08_IT101-DM/slides/data-introduction.md b/2021/2021-06-08_IT101-DM/slides/data-introduction.md
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@@ -0,0 +1 @@
+../../2021-04-20_IT101-DM/slides/data-introduction.md
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@@ -0,0 +1 @@
+../../2021-04-20_IT101-DM/slides/data_flow.md
\ No newline at end of file
diff --git a/2021/2021-06-08_IT101-DM/slides/fair-principles.md b/2021/2021-06-08_IT101-DM/slides/fair-principles.md
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+../../2021-04-20_IT101-DM/slides/fair-principles.md
\ No newline at end of file
diff --git a/2021/2021-06-08_IT101-DM/slides/howtos.md b/2021/2021-06-08_IT101-DM/slides/howtos.md
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@@ -0,0 +1 @@
+../../2021-04-20_IT101-DM/slides/howtos.md
\ No newline at end of file
diff --git a/2021/2021-06-08_IT101-DM/slides/img b/2021/2021-06-08_IT101-DM/slides/img
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@@ -0,0 +1 @@
+../../2021-04-20_IT101-DM/slides/img
\ No newline at end of file
diff --git a/2021/2021-06-08_IT101-DM/slides/index.md b/2021/2021-06-08_IT101-DM/slides/index.md
new file mode 100644
index 0000000000000000000000000000000000000000..e8d2e30cab782477b3e2ecd19baa5085758fc09c
--- /dev/null
+++ b/2021/2021-06-08_IT101-DM/slides/index.md
@@ -0,0 +1,20 @@
+# IT101 - Working with computers
+<br>IT101 - Working with computers<br>
+## June 8th, 2021
+
+<div style="top: 6em; left: 0%; position: absolute;">
+ <img src="theme/img/lcsb_bg.png">
+</div>
+
+<div style="top: 5em; left: 60%; position: absolute;">
+ <img src="slides/img/r3-training-logo.png" height="200px">
+ <br><br><br><br>
+ <h3></h3>
+ <br><br><br>
+ <h4>
+ Vilem Ded<br>
+ Data Steward<br>
+ vilem.ded@uni.lu<br>
+ <i>Luxembourg Centre for Systems Biomedicine</i>
+ </h4>
+</div>
diff --git a/2021/2021-06-08_IT101-DM/slides/ingestion.md b/2021/2021-06-08_IT101-DM/slides/ingestion.md
new file mode 120000
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@@ -0,0 +1 @@
+../../2021-04-20_IT101-DM/slides/ingestion.md
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@@ -0,0 +1 @@
+../../2021-04-20_IT101-DM/slides/introduction.md
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diff --git a/2021/2021-06-08_IT101-DM/slides/list.json b/2021/2021-06-08_IT101-DM/slides/list.json
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--- /dev/null
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@@ -0,0 +1 @@
+../../2021-04-20_IT101-DM/slides/list.json
\ No newline at end of file
diff --git a/2021/2021-06-08_IT101-DM/slides/overview.md b/2021/2021-06-08_IT101-DM/slides/overview.md
new file mode 120000
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@@ -0,0 +1 @@
+../../2021-04-20_IT101-DM/slides/overview.md
\ No newline at end of file
diff --git a/2021/2021-06-08_IT101-DM/slides/problem_solving.md b/2021/2021-06-08_IT101-DM/slides/problem_solving.md
new file mode 100644
index 0000000000000000000000000000000000000000..f34e0a2bc914e35010f492936be5a9506c8ecf27
--- /dev/null
+++ b/2021/2021-06-08_IT101-DM/slides/problem_solving.md
@@ -0,0 +1,11 @@
+# Problem solving
+A guide for solving computing issues
+
+1. Express the problem
+ * Write down what you want to achieve
+2. Search for help
+ * Read **FAQs**, **help pages** and the **official documentation** well before turning to Google
+ * Use stack exchange, forums and related resources (carefully)
+3. Ask an expert
+ * Submit the problem in writing
+ * Make the question interesting
diff --git a/2021/2021-06-08_IT101-DM/slides/r3_group.md b/2021/2021-06-08_IT101-DM/slides/r3_group.md
new file mode 100644
index 0000000000000000000000000000000000000000..9005ade96c9eaf2a31864ab2dfd0f465fc16c8ba
--- /dev/null
+++ b/2021/2021-06-08_IT101-DM/slides/r3_group.md
@@ -0,0 +1,140 @@
+# Responsible and Reproducible Research (R<sup>3</sup>)
+## What is R<sup>3</sup>?
+
+
+A multi-facetted change management
+process built on 3 pillars:
+
+- R3 pathfinder
+
+- R3 school
+
+- R3 accelerator
+
+Common link module: R3 clinic
+
+<div style="top: -1em; left: 50%; position: absolute;">
+ <img src="slides/img/3pillars-full.png">
+</div>
+
+<br>
+<br>
+
+<aside class="notes">
+Pathfinder - policies, finding optimal data management changes<br>
+School - courses, howtos, trainnings<br>
+Accelerator - advanced teams and their boost/support, CI/CD setup<br>
+Clinic - hands-on, meetings in groups, code review + suggestions<br>
+</aside>
+
+## R<sup>3</sup> Training
+ * LCSB's Monthly Data Management and Data Protection training
+ * ELIXIR Luxembourg's trainings <br>
+ https://elixir-luxembourg.org/training
+ * Reproducible analysis workflows with Snakemake and Conda (2021-07-14)
+ * Best practices in research data management and stewardship (2021-06-14)
+ * R<sup>3</sup> school Git basics - every 4 months
+ <aside class="notes">
+ Direct newcommers to this monthly training
+ </aside>
+
+
+
+# Responsible and Reproducible Research (R<sup>3</sup>)
+<section data-transition="none" data-background-image="slides/img/r3-training-logo.png" data-background-size="1000px" data-background-opacity="0.1">
+</section>
+<div style="display:block;text-align:center;position:relative;" >
+<div class="profile-container">
+
+ * Reinhard Schneider
+ * <img src="slides/img/R3_profile_pictures/reinhard_schneider.png">
+ * Head of Bioinformatics Core
+
+</div>
+<div class="profile-container">
+
+ * Pinar Alper
+ * <img src="slides/img/R3_profile_pictures/pinar_alper.png">
+ * Datasteward
+
+</div>
+<div class="profile-container">
+
+ * Yohan Yarosz</li>
+ * <img src="slides/img/R3_profile_pictures/yohan_yarosz.png">
+ * Development
+
+</div>
+<div class="profile-container">
+
+ * Laurent Heirendt</li>
+ * <img src="slides/img/R3_profile_pictures/laurent_heirendt.png">
+ * Git, CI
+
+</div>
+<div class="profile-container">
+
+ * Sarah Peter</li>
+ * <img src="slides/img/R3_profile_pictures/sarah_peter.png">
+ * Infrastructure
+
+</div>
+<div class="profile-container">
+
+ * Valentine Groues</li>
+ * <img src="slides/img/R3_profile_pictures/valentine_groues.png">
+ * Development
+
+</div>
+<div class="profile-container">
+
+ * Vilem Ded</li>
+ * <img src="slides/img/R3_profile_pictures/vilem_ded.png">
+ * Datasteward
+
+</div>
+<div class="profile-container">
+
+ * Noua Toukourou</li>
+ * <img src="slides/img/R3_profile_pictures/noua_toukourou.png">
+ * Infrastructure
+
+</div>
+<div class="profile-container">
+
+ * Alexey Kolodkin</li>
+ * <img src="slides/img/R3_profile_pictures/alexey_kolodkin.png">
+ * Datasteward
+
+</div>
+<div class="profile-container">
+
+ * Maharshi Vyas</li>
+ * <img src="slides/img/R3_profile_pictures/maharshi_vyas.png">
+ * Infrastructure
+
+</div>
+
+<div class="profile-container">
+
+ * Nene Barry</li>
+ * <img src="slides/img/R3_profile_pictures/nene_barry.png">
+ * Datasteward
+
+</div>
+
+<div class="profile-container">
+
+ * Karim Chaouch</li>
+ * <img src="slides/img/R3_profile_pictures/karim_chaouch.png">
+ * Development
+
+</div>
+<div class="profile-container">
+
+ * Christophe Trefois
+ * <img src="slides/img/R3_profile_pictures/christophe_trefois.png">
+ * R<sup>3</sup> team lead
+
+</div>
+</div>
diff --git a/2021/2021-06-08_IT101-DM/slides/reproducibility.md b/2021/2021-06-08_IT101-DM/slides/reproducibility.md
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@@ -0,0 +1 @@
+../../2021-04-20_IT101-DM/slides/storage_setup.md
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+../../2021-04-20_IT101-DM/slides/thanks.md
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+../../2021-04-20_IT101-DM/slides/visualization.md
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