Commit bb6f33ae authored by Elisabeth Guerard's avatar Elisabeth Guerard
Browse files

finish layout #2

parent c532cf1c
Pipeline #10483 failed with stage
in 15 seconds
_site
.sass-cache
.jekyll-metadata
\ No newline at end of file
.jekyll-metadata
Gemfile.lock
/_plugins
\ No newline at end of file
......@@ -14,7 +14,8 @@ Shaman Narayanasamy†, Yohan Jarosz†, Emilie E. L. Muller, Anna Heintz-Buscha
</div>
{: .rgridblock}
<div>
{: .rblock}
<div>
### <i class="fas fa-globe"></i> Website
......@@ -71,7 +72,7 @@ We use the [checkpoint][urlLibraryCheck] library to ensure that all of the neces
<hr>
**IMP** report contains all information needed to reproduce the same workflow, from the version of **IMP** used to make the analysis to the configuration file used to start the workflow. Everything is condensed and organized within an HTML report. Some reports can be found [here][urlIMPReport].
</div>
</div>
[urlIMP]:https://imp.pages.uni.lu/web/
[urlGenomeBiology]:https://genomebiology.biomedcentral.com/articles/10.1186/s13059-016-1116-8
......
......@@ -14,7 +14,8 @@ Lisa M Smits†, Lydia Reinhardt†, Peter Reinhardt, Michael Glatza, Anna S Mon
</div>
{: .rgridblock}
<div>
{: .rblock}
<div>
### <i class="fas fa-file-download"></i> RAW DATA
......@@ -36,7 +37,7 @@ The source code used to make the publication is available on [Github][urlGithub]
<hr>
Data is accessible through [NCBI GEO][urlNCBI] website.
</div>
</div>
[urlDoi]:https://doi.org/10.1038/s41531-019-0078-4
[urlWebdav]:https://webdav-r3lab.uni.lu/public/data/modeling-parkinsons-disease-in-midbrain-like-organoids/
......
......@@ -13,7 +13,8 @@ Lisa M Smits†, Magni Stefano, Grzyb Kamil, Antony Paul MA, Krüger Rejko, Skup
</div>
{: .rgridblock}
<div>
{: .rblock}
<div>
### <i class="fas fa-code"></i> SOURCE CODE
......@@ -35,6 +36,7 @@ Data is accessible through [LCSB WebDAV][urlWebdav] website.
<hr>
The complete Dataset is available [here][urlWebdavall].
</div>
</div>
[urlBioRxiv]:https://www.biorxiv.org/content/10.1101/589598v1
[urlWebdavall]: https://webdav-r3lab.uni.lu/public/data/single-cell-transcriptomics-reveals-multiple-neuronal-cell-types-in-human-midbrain-specific-organoids/raw-data/
......
......@@ -13,6 +13,8 @@ Please cite the article on [Oxford Bioinformatics][urlDoi].
Sascha Herzinger, Wei Gu, Venkata Satagopam, Serge Eifes, Kavita Rege, Adriano Barbosa-Silva, Reinhard Schneider, on behalf of the eTRIKS Consortium
</div>
{: .rgridblock}
<div>
{: .rblock}
<div>
### <i class="fas fa-globe"></i> Website
......@@ -40,6 +42,7 @@ All available documentation can be found [here][urlDocSmartR]
<hr>
Several videos have been recorded to showcase the capabilities of SmartR. They can be accessed via [YouTube][urlYouTubeSmartR].
</div>
</div>
[urlYouTubeSmartR]: https://www.youtube.com/channel/UC0LP15lmuMkgYYLaFj3SKew
[urlDocSmartR]: https://github.com/transmart/SmartR/tree/master/doc
......
......@@ -15,7 +15,8 @@ gem "bundler", "> 1.16.1"
# This is the default theme for new Jekyll sites. You may change this to anything you like.
gem "minima", "~> 2.0"
gem 'jekyll-theme-primer', '~> 0.5.2'
gem 'jekyll-theme-lcsb-default', '~> 0.2.5', :git => "https://git-r3lab.uni.lu/core-services/jekyll-theme-lcsb-default.git", :branch => "master"
gem 'jekyll-theme-lcsb-default', '~> 0.2.21', :git => "https://git-r3lab.uni.lu/core-services/jekyll-theme-lcsb-default.git", :branch => "develop"
#gem 'jekyll-theme-lcsb-default', :path => '~/djangoeli/dev/myenv/Gitlab_work/jekyll-theme-lcsb-default'
# If you want to use GitHub Pages, remove the "gem "jekyll"" above and
......
GIT
remote: https://git-r3lab.uni.lu/core-services/jekyll-theme-lcsb-default.git
revision: 0d8c02bd35f4b0ebf563ee09f668cc6ac2e80935
branch: master
revision: bf6b99e57156ea22d3b29717686ca5d7842d9ac8
branch: develop
specs:
jekyll-theme-lcsb-default (0.2.20)
jekyll-theme-lcsb-default (0.2.21)
jekyll (~> 3.8)
jekyll-seo-tag (~> 2.5)
......@@ -66,7 +66,7 @@ GEM
jekyll (~> 3.5)
jekyll-feed (~> 0.9)
jekyll-seo-tag (~> 2.1)
multipart-post (2.0.0)
multipart-post (2.1.1)
octokit (4.14.0)
sawyer (~> 0.8.0, >= 0.5.3)
pathutil (0.16.2)
......@@ -100,7 +100,7 @@ DEPENDENCIES
jekyll (~> 3.8.5)
jekyll-feed (~> 0.6)
jekyll-paginate-v2 (~> 1.7)
jekyll-theme-lcsb-default (~> 0.2.5)!
jekyll-theme-lcsb-default (~> 0.2.21)!
jekyll-theme-primer (~> 0.5.2)
minima (~> 2.0)
tzinfo-data
......
......@@ -9,6 +9,7 @@ Here you can find a collection of tools used @LCSB to provide support for reprod
## Associated services
[![Gitlab]({{ "//images/gitlab-logo.png" | relative_url }}){:width="120px"}](https://git-r3lab.uni.lu/)
**Gitlab** is an open source software that provide Version control and many other usefule features for devellopers and scientists.
......@@ -18,3 +19,6 @@ Here you can find a collection of tools used @LCSB to provide support for reprod
[![Webdav]({{ "//images/webdav-logo.png" | relative_url }}){:width="120px"}](https://webdav-r3lab.uni.lu/)
**WEBDAV** is a file sharing system over the web that brings more advanced security and control that a traditionnal FTP server.
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment