1. 22 Jul, 2009 1 commit
    • Aaron's avatar
      Version 2.1.1 · 235f6e7a
      Aaron authored
      	1. Added limits.h to bedFile.h to prevent compilation errors on some systems.
      	2. Fixed the bedFile.cpp parsing logic to allow proper parsing of track and browser lines
  2. 05 May, 2009 1 commit
    • Aaron Quinlan's avatar
      Strandedness. reportBed in bedFile. peIntersect · ac52b452
      Aaron Quinlan authored
      	1. Added strandedness to relevant programs (e.g. intersectBed, mergeBed, etc.)
      	2. Moved reportBed and reportBedRange to bedFile.cpp to clean up code
      	3. Sped up file parsing.  Added lineFileUtilities.cpp
      	4. Added peIntersectBed