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R3
legacy
bedtools2
Commits
cc963efb
Commit
cc963efb
authored
May 26, 2015
by
Gaik Tamazian
Browse files
Tests for IUPAC processing fixed
parent
ab600e66
Changes
3
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test/getfasta/test-getfasta.sh
View file @
cc963efb
...
...
@@ -88,7 +88,7 @@ AGCTYRWSKMDVHBXN
agctyrwskmdvhbxn"
>
exp
$BT
getfasta
-fi
test.iupac.fa
-bed
test.iupac.bed
-fo
-
>
obs
check obs exp
rm
obs exp
rm
obs exp
test.iupac.fa.fai
# test IUPAC revcomp
...
...
@@ -100,4 +100,5 @@ NXVDBHKMSWYRAGCT
nxvdbhkmswyragct"
>
exp
$BT
getfasta
-fi
test.iupac.fa
-bed
test.iupac.bed
-s
-fo
-
>
obs
check obs exp
rm
obs exp
rm
obs exp test.iupac.fa.fai
test/getfasta/test.iupac.bed
0 → 100644
View file @
cc963efb
1 0 16 1 1000 -
2 0 16 1 1000 -
test/getfasta/test.iupac.fa
0 → 100644
View file @
cc963efb
>1
AGCTYRWSKMDVHBXNACGT
>2
agctyrwskmdvhbxnacgt
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