From b7ac6d1fc91b67aca3b1c00289de803ac2f9ab7e Mon Sep 17 00:00:00 2001
From: Aaron <aaronquinlan@gmail.com>
Date: Sun, 27 Jan 2013 14:05:29 -0500
Subject: [PATCH] [DOCS] multiple tweaks.
---
docs/conf.py | 6 ++++--
docs/content/tools/merge.rst | 1 +
docs/templates/sidebar-intro.html | 21 +++++++++++++++++++++
3 files changed, 26 insertions(+), 2 deletions(-)
create mode 100644 docs/templates/sidebar-intro.html
diff --git a/docs/conf.py b/docs/conf.py
index e20cc00f..14b642bf 100755
--- a/docs/conf.py
+++ b/docs/conf.py
@@ -44,7 +44,7 @@ master_doc = 'index'
# General information about the project.
project = u'bedtools'
-copyright = u'2012'
+copyright = u'2009 - 2013, Aaron R. Quinlan'
# The version info for the project you're documenting, acts as replacement for
# |version| and |release|, also used in various other places throughout the
@@ -135,7 +135,9 @@ html_last_updated_fmt = '%b %d, %Y'
#html_use_smartypants = True
# Custom sidebar templates, maps document names to template names.
-#html_sidebars = {}
+html_sidebars = {
+ 'index': ['sidebar-intro.html', 'sourcelink.html', 'searchbox.html']
+}
# Additional templates that should be rendered to pages, maps page names to
# template names.
diff --git a/docs/content/tools/merge.rst b/docs/content/tools/merge.rst
index b8bfed73..1b9eb767 100755
--- a/docs/content/tools/merge.rst
+++ b/docs/content/tools/merge.rst
@@ -21,6 +21,7 @@ file into a single feature which spans all of the combined features.
.. seealso::
:doc:`../tools/cluster`
+ :doc:`../tools/complement`
==========================================================================
diff --git a/docs/templates/sidebar-intro.html b/docs/templates/sidebar-intro.html
new file mode 100644
index 00000000..821fd94c
--- /dev/null
+++ b/docs/templates/sidebar-intro.html
@@ -0,0 +1,21 @@
+<p>
+ Bedtools is a fast, flexible toolset for genome arithmetic.
+</p>
+<h3>Bedtools links</h3>
+<ul>
+ <li><a target="_blank" href="https://github.com/arq5x/bedtools/issues">Issue Tracker</a></li>
+ <li><a target="_blank" href="https://github.com/arq5x/bedtools">Source @ GitHub</a></li>
+ <li><a target="_blank" href="https://bedtools.googlecode.com">Releases @ Google Code</a></li>
+ <li><a target="_blank" href="http://groups.google.com/group/bedtools-discuss">Mailing list @ Google Groups</a></li>
+ <li><a target="_blank" href="http://quinlanlab.org">Quinlan lab @ UVa</a></li>
+</ul>
+
+<h3>Sources</h3>
+<p><a href="https://github.com/arq5x/bedtools">Browse source @ GitHub</a>.</p>
+
+<h3>Releases</h3>
+<ul>
+ <li><a href="http://bedtools.googlecode.com/files/BEDTools.v2.17.0.tar.gz">2.17.0 (current)</a></li>
+ <li><a href="http://bedtools.googlecode.com/files/BEDTools.v2.16.2.tar.gz">2.16.2</a></li>
+</ul>
+
--
GitLab