From b77e0ebb0de4eadf1f0bcbcacb9788980351d6e7 Mon Sep 17 00:00:00 2001
From: arq5x <arq5x@virginia.edu>
Date: Sat, 1 Feb 2014 20:05:09 -0500
Subject: [PATCH] [ENH] correct Jaccard output header
---
src/jaccard/jaccard.cpp | 2 +-
test/jaccard/test-jaccard.sh | 10 +++++-----
2 files changed, 6 insertions(+), 6 deletions(-)
diff --git a/src/jaccard/jaccard.cpp b/src/jaccard/jaccard.cpp
index 8df39987..0c22fa8d 100644
--- a/src/jaccard/jaccard.cpp
+++ b/src/jaccard/jaccard.cpp
@@ -85,7 +85,7 @@ void Jaccard::CalculateJaccard() {
// header
cout << "intersection\t"
- << "union\t"
+ << "union-intersection\t"
<< "jaccard\t"
<< "n_intersections"
<< endl;
diff --git a/test/jaccard/test-jaccard.sh b/test/jaccard/test-jaccard.sh
index 81e316c5..9018d8af 100644
--- a/test/jaccard/test-jaccard.sh
+++ b/test/jaccard/test-jaccard.sh
@@ -14,7 +14,7 @@ check()
###########################################################
echo " jaccard.t01...\c"
echo \
-"intersection union jaccard n_intersections
+"intersection union-intersection jaccard n_intersections
110 110 1 2" > exp
$BT jaccard -a a.bed -b a.bed > obs
check obs exp
@@ -23,7 +23,7 @@ rm obs exp
echo " jaccard.t02...\c"
echo \
-"intersection union jaccard n_intersections
+"intersection union-intersection jaccard n_intersections
10 140 0.0714286 1" > exp
$BT jaccard -a a.bed -b b.bed > obs
check obs exp
@@ -31,7 +31,7 @@ rm obs exp
echo " jaccard.t03...\c"
echo \
-"intersection union jaccard n_intersections
+"intersection union-intersection jaccard n_intersections
10 200 0.05 1" > exp
$BT jaccard -a a.bed -b c.bed > obs
check obs exp
@@ -40,7 +40,7 @@ rm obs exp
echo " jaccard.t04...\c"
echo \
-"intersection union jaccard n_intersections
+"intersection union-intersection jaccard n_intersections
0 210 0 0" > exp
$BT jaccard -a a.bed -b d.bed > obs
check obs exp
@@ -51,7 +51,7 @@ rm obs exp
###########################################################
echo " jaccard.t05...\c"
echo \
-"intersection union jaccard n_intersections
+"intersection union-intersection jaccard n_intersections
10 140 0.0714286 1" > exp
cat a.bed | $BT jaccard -a - -b b.bed > obs
check obs exp
--
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