From b1588c300a373a2736736f98a220614b7c1224b4 Mon Sep 17 00:00:00 2001
From: Aaron <aaronquinlan@gmail.com>
Date: Tue, 29 Jan 2013 08:31:03 -0500
Subject: [PATCH] [DOC] update merge docs
---
docs/content/tools/merge.rst | 12 +++++++-----
1 file changed, 7 insertions(+), 5 deletions(-)
diff --git a/docs/content/tools/merge.rst b/docs/content/tools/merge.rst
index c8c17a4a..1d6a0fe4 100755
--- a/docs/content/tools/merge.rst
+++ b/docs/content/tools/merge.rst
@@ -46,11 +46,13 @@ Option Description
**-n** Report the number of BED entries that were merged. *1 is reported if no merging occurred*.
**-d** Maximum distance between features allowed for features to be merged. *Default is 0. That is, overlapping and/or book-ended features are merged*.
**-nms** Report the names of the merged features separated by commas. Change delimiter with ``-delim``
-**-scores** | Report the scores of the merged features. Specify one of
- | the following options for reporting scores:
- | sum, min, max,
- | mean, median, mode, antimode,
- | collapse (i.e., print a semicolon-separated list)
+
+**-scores** | Report the scores of the merged features.
+ | Specify one of the following options for reporting scores:
+ | ``sum``, ``min``, ``max``,
+ | ``mean``, ``median``, ``mode``, ``antimode``,
+ | ``collapse`` (i.e., print a semicolon-separated list)
+
**-delim** | Specify a custom delimiter for the -nms and -scores concat options
| Example: ``-delim "|"``
| ``Default: ","``
--
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