Commit ada04b66 authored by arq5x's avatar arq5x
Browse files

fix merge docs on how to report strand with . Thanks to @balwierz.

parent e65c98bc
......@@ -113,9 +113,17 @@ The ``-s`` option will only merge intervals that are overlapping/bookended
chr1 501 1000 a4 4 +
$ bedtools merge -i A.bed -s
chr1 100 250 +
chr1 501 1000 +
chr1 250 500 -
chr1 100 250
chr1 501 1000
chr1 250 500
To also report the strand, you could use the ``-c`` and ``-o`` operators (see below for more details):
.. code-block:: bash
$ bedtools merge -i A.bed -s -c 6 -o distinct
chr1 100 250 +
chr1 501 1000 +
==========================================================================
``-S`` Reporting merged intervals on a specific strand.
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment