Skip to content
GitLab
Projects
Groups
Snippets
/
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Sign in
Toggle navigation
Menu
Open sidebar
R3
legacy
bedtools2
Commits
ada04b66
Commit
ada04b66
authored
Apr 13, 2015
by
arq5x
Browse files
fix merge docs on how to report strand with . Thanks to @balwierz.
parent
e65c98bc
Changes
1
Hide whitespace changes
Inline
Side-by-side
docs/content/tools/merge.rst
View file @
ada04b66
...
...
@@ -113,9 +113,17 @@ The ``-s`` option will only merge intervals that are overlapping/bookended
chr1 501 1000 a4 4 +
$ bedtools merge -i A.bed -s
chr1 100 250 +
chr1 501 1000 +
chr1 250 500 -
chr1 100 250
chr1 501 1000
chr1 250 500
To also report the strand, you could use the ``-c`` and ``-o`` operators (see below for more details):
.. code-block:: bash
$ bedtools merge -i A.bed -s -c 6 -o distinct
chr1 100 250 +
chr1 501 1000 +
==========================================================================
``-S`` Reporting merged intervals on a specific strand.
...
...
Write
Preview
Supports
Markdown
0%
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment