From 8f82f4dbcc0a606e23233b529dae3e6776276fcd Mon Sep 17 00:00:00 2001 From: Aaron <aaronquinlan@gmail.com> Date: Mon, 14 Jan 2013 23:11:42 -0500 Subject: [PATCH] add unstaged files --- docs/content/faq.rst | 39 ++++++++++++++++++++++++++++++++ docs/content/tips-and-tricks.rst | 3 +++ 2 files changed, 42 insertions(+) create mode 100644 docs/content/faq.rst create mode 100644 docs/content/tips-and-tricks.rst diff --git a/docs/content/faq.rst b/docs/content/faq.rst new file mode 100644 index 00000000..b55c374d --- /dev/null +++ b/docs/content/faq.rst @@ -0,0 +1,39 @@ +############ +FAQ +############ + + +==================== +Installation issues +==================== + +Why am I getting all of these zlib errors? +.......................................... + +On certain operating systems (especially free Linux distributions) the complete +zlib libraries are not installed. Bedtools depends upon zlib in order to +decompress gzipped files. + +.. code-block:: bash + + - Building main bedtools binary. + obj/gzstream.o: In function gzstreambuf::open(char const*, int): + gzstream.C:(.text+0x2a5): undefined reference to gzopen64' + collect2: ld returned 1 exit status + make: *** [all] Error 1 + +If you see an error such as the above, it suggests you need to install the +``zlib`` and ``zlib1g-dev`` libraries. This is typically straightforward using +package managers. For example, on Debian/Ubuntu this would be: + +.. code-block:: bash + + apt-get install zlib + apt-get install zlib1g-dev + +and on Fedora/Centos this would be: + +.. code-block:: bash + + yum install zlib + yum install zlib1g-dev diff --git a/docs/content/tips-and-tricks.rst b/docs/content/tips-and-tricks.rst new file mode 100644 index 00000000..28b149b7 --- /dev/null +++ b/docs/content/tips-and-tricks.rst @@ -0,0 +1,3 @@ +############### +Tips and Tricks +############### \ No newline at end of file -- GitLab