Commit 76aa9d70 authored by arq5x's avatar arq5x
Browse files

add note about CLI change for coverage

parent 070ff0d3
......@@ -21,9 +21,11 @@ computes the fraction of bases in the interval in A that were overlapped by one
.. important::
As of version 2.24.0, the `coverage` tool can accept multiple files for
the `-b` option. This allows one to identify overlaps between a single
query (`-a`) file and multiple database files (`-b`) at once!
As of version 2.24.0, the `coverage` tool has changed such that the coverage is
computed for the A file, not the B file. This changes the command line interface
to be consistent with the other tools. Also, the `coverage` tool
can accept multiple files for the `-b` option. This allows one to measure
coverage between a single query (`-a`) file and multiple database files (`-b`) at once!
.. seealso::
......
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