From 3b9fc3e1ebc989dc857f053b56ff59ec7e7c8509 Mon Sep 17 00:00:00 2001
From: nkindlon <nek3d@virginia.edu>
Date: Mon, 18 Nov 2013 12:43:02 -0500
Subject: [PATCH] Added unit test for unrecognized arguments.

---
 test/intersect/new_test-intersect.sh | 9 +++++++++
 1 file changed, 9 insertions(+)

diff --git a/test/intersect/new_test-intersect.sh b/test/intersect/new_test-intersect.sh
index 21636abd..4900d424 100755
--- a/test/intersect/new_test-intersect.sh
+++ b/test/intersect/new_test-intersect.sh
@@ -595,6 +595,15 @@ check obs exp
 rm obs exp dummy.txt
 
 
+###########################################################
+#  Test that we throw an error for unrecognized arguments
+############################################################
+echo "    intersect.new.t52...\c"
+echo "ERROR. Unrecognized argument: -wrongArg" > exp
+$BT intersect -a a.bed -b b.bed -wrongArg 2>&1 > /dev/null | head -2 | tail -1 > obs
+check obs exp
+rm obs exp
+
 
 
 
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