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R3
legacy
bedtools2
Commits
291f23be
Commit
291f23be
authored
Jan 26, 2015
by
Neil Kindlon
Browse files
src/utils/Contexts/ContextBase.cpp
parent
930ddce8
Changes
1
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Inline
Side-by-side
src/utils/Contexts/ContextBase.h
View file @
291f23be
...
...
@@ -38,7 +38,7 @@ public:
typedef
enum
{
UNSPECIFIED_PROGRAM
,
INTERSECT
,
WINDOW
,
CLOSEST
,
COVERAGE
,
MAP
,
GENOMECOV
,
MERGE
,
CLUSTER
,
COMPLEMENT
,
SUBTRACT
,
SLOP
,
FLANK
,
SORT
,
RANDOM
,
SAMPLE
,
SHUFFLE
,
ANNOTATE
,
MULTIINTER
,
UNIONBEDG
,
PAIRTOBED
,
PAIRTOPAIR
,
BAMTOBED
,
BEDTOBAM
,
BEDTOFASTQ
,
BEDPETOBAM
,
BED12TOBED6
,
GETFASTA
,
MASKFASTA
,
NUC
,
MULTICOV
,
TAG
,
JACCARD
,
OVERLAP
,
IGV
,
LINKS
,
MAKEWINDOWS
,
GROUPBY
,
EXPAND
}
PROGRAM_TYPE
;
MULTICOV
,
TAG
,
JACCARD
,
OVERLAP
,
IGV
,
LINKS
,
MAKEWINDOWS
,
GROUPBY
,
EXPAND
,
SPACING
}
PROGRAM_TYPE
;
PROGRAM_TYPE
getProgram
()
const
{
return
_program
;
}
FileRecordMgr
*
getFile
(
int
fileIdx
)
{
return
_files
[
fileIdx
];
}
...
...
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