From 1b810b6226ce4461cfec982d9aa0b080710999b3 Mon Sep 17 00:00:00 2001
From: arq5x <arq5x@virginia.edu>
Date: Wed, 11 Dec 2013 12:51:02 -0500
Subject: [PATCH] [ENH] intergrate merge changes from @kcha.
---
src/mergeBed/mergeBed.cpp | 7 ++++---
1 file changed, 4 insertions(+), 3 deletions(-)
diff --git a/src/mergeBed/mergeBed.cpp b/src/mergeBed/mergeBed.cpp
index e556e44b..526b45f5 100644
--- a/src/mergeBed/mergeBed.cpp
+++ b/src/mergeBed/mergeBed.cpp
@@ -186,12 +186,12 @@ void BedMerge::ReportStranded(string chrom, int start,
// just the merged intervals
if (_numEntries == false && _reportNames == false &&
_reportScores == false) {
- printf("\t%s\n", strand.c_str());
+ printf("\t\t\t%s\n", strand.c_str());
}
// merged intervals and counts
else if (_numEntries == true && _reportNames == false &&
_reportScores == false) {
- printf("\t%d\t%s\n", mergeCount, strand.c_str());
+ printf("\t\t%d\t%s\n", mergeCount, strand.c_str());
}
// merged intervals, counts, and scores
else if (_numEntries == true && _reportNames == false &&
@@ -219,11 +219,12 @@ void BedMerge::ReportStranded(string chrom, int start,
else if (_numEntries == false && _reportNames == true &&
_reportScores == false) {
ReportMergedNames(names);
- printf("\t%s\n", strand.c_str());
+ printf("\t\t%s\n", strand.c_str());
}
// merged intervals and scores
else if (_numEntries == false && _reportNames == false &&
_reportScores == true) {
+ printf("\t");
ReportMergedScores(scores);
printf("\t%s\n", strand.c_str());
}
--
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