Merge error corrections

src/closestFile/closestMain.cpp

@@ -100,11 +100,11 @@ void closest_help(void) {
     cerr                        << "\t\t- \"each\"    Report closest records for each database (default)." << endl;
     cerr                        << "\t\t- \"all\"  Report closest records among all databases." << endl << endl;
 
-    cerr << "\t-names\t"        << "When using multiple databases (-b), provide an alias for each that" << endl;
-    cerr                        <<"\t\twill appear instead of a fileId when also printing the DB record." << endl << endl;
+	cerr << "\t-names\t" 		<< "When using multiple databases (-b), provide an alias for each that" << endl;
+	cerr 						<<"\t\twill appear instead of a fileId when also printing the DB record." << endl << endl;
 
-    cerr << "\t-filenames"      << "\tWhen using multiple databases (-b), show each complete filename" << endl;
-    cerr                        <<"\t\t\tinstead of a fileId when also printing the DB record." << endl << endl;
+	cerr << "\t-filenames" 		<< "\tWhen using multiple databases (-b), show each complete filename" << endl;
+	cerr 						<<"\t\t\tinstead of a fileId when also printing the DB record." << endl << endl;
 
     cerr << "\t-k\t"            << "Report the k closest hits. Default is 1. If tieMode = \"all\", " << endl;
     cerr                        << "\t\t- all ties will still be reported." << endl << endl;

src/intersectFile/intersectMain.cpp

@@ -124,10 +124,10 @@ void intersect_help(void) {
     cerr 						<<"\t\tother software tools and scripts that need to process one" << endl;
     cerr 						<<"\t\tline of bedtools output at a time." << endl << endl;
 
-    cerr << "\t-names\t"       << "When using multiple databases (-b), provide an alias for each that" << endl;
+    cerr << "\t-names\t"       << "When using multiple databases, provide an alias for each that" << endl;
     cerr						<<"\t\twill appear instead of a fileId when also printing the DB record." << endl << endl;
 
-    cerr << "\t-filenames"       << "\tWhen using multiple databases (-b), show each complete filename" << endl;
+    cerr << "\t-filenames"       << "\tWhen using multiple databases, show each complete filename" << endl;
     cerr						<<"\t\t\tinstead of a fileId when also printing the DB record." << endl << endl;
 
     cerr << "\t-sortout\t"       << "When using multiple databases, sort the output DB hits" << endl;

src/utils/Contexts/ContextBase.cpp

@@ -65,6 +65,7 @@ ContextBase::ContextBase()
 {
 	_programNames["intersect"] = INTERSECT;
 	_programNames["sample"] = SAMPLE;
+	_programNames["spacing"] = SPACING;
 	_programNames["map"] = MAP;
 	_programNames["merge"] = MERGE;