Commit 9672c874 authored by Patrick May's avatar Patrick May

config: new merge assembly parameter

parent 6c63da85
Pipeline #35824 failed with stages
in 14 seconds
......@@ -52,7 +52,7 @@ sortmerna:
assembly:
hybrid: true
assembler: megahit
merge: "cap3" # how to do merge(assembly A, assembly B from reads not mapping to A); none or "" = use only assembly A
merge: "cap3" # how to do merge(assembly A, assembly B from reads not mapping to A); none or "" = use only assembly A or "concat" or "flye"
mink: 25
maxk: 99
step: 4
......
Markdown is supported
0% or
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment