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Commit 6214b97e authored by ahb-ufz's avatar ahb-ufz
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typo in relative paths for input

parent bdd119e6
Pipeline #39804 failed with stages
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              workflow/rules/ini/config.smk
              View file @ 6214b97e
              ...@@ -139,7 +139,7 @@ if config['raws']['Alignment_metatranscriptomics']: ...@@ -139,7 +139,7 @@ if config['raws']['Alignment_metatranscriptomics']:
              else: else:
              MTaln = os.getcwd() + "/" + os.path.expandvars(config['raws']['Alignment_metatranscriptomics']) MTaln = os.getcwd() + "/" + os.path.expandvars(config['raws']['Alignment_metatranscriptomics'])
              else: else:
              MTaln = config['raws'][''] MTaln = config['raws']['Alignment_metatranscriptomics']
              if config['raws']['']: if config['raws']['']:
              if os.path.isabs(os.path.expandvars(config['raws']['Gff'])): if os.path.isabs(os.path.expandvars(config['raws']['Gff'])):
              ANN = os.path.expandvars(config['raws']['Gff']) ANN = os.path.expandvars(config['raws']['Gff'])
              ......
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