Add data

metAmos_commands/run_metAmos_CAMI_high.sh

+#!/bin/bash -l
+
+export PATH=$PATH:/home/snarayanasamy/Work/tools/metAMOS-1.5rc3/
+OUTDIR="/mnt/md1200/snarayanasamy/metAmosAnalysis/CAMI_high"
+
+date
+
+initPipeline -1 /mnt/md1200/snarayanasamy/IMP_data/CAMI/High_Complexity_Dataset/HCTD.1.fq -2 /mnt/md1200/snarayanasamy/IMP_data/CAMI/High_Complexity_Dataset/HCTD.1.fq -d $OUTDIR -i 250:500,250:500
+
+runPipeline -d $OUTDIR -p 8
+
+date

metAmos_commands/run_metAmos_CAMI_low.sh

+#!/bin/bash -l
+
+export PATH=$PATH:/home/snarayanasamy/Work/tools/metAMOS-1.5rc3/
+OUTDIR="/mnt/md1200/snarayanasamy/metAmosAnalysis/CAMI_low"
+
+date
+
+initPipeline -1 /mnt/md1200/snarayanasamy/IMP_data/CAMI/Low_Complexity_Test_Dataset/LCTD.1.fq -2 /mnt/md1200/snarayanasamy/IMP_data/CAMI/Low_Complexity_Test_Dataset/LCTD.2.fq -d $OUTDIR -i 250:500,250:500
+
+runPipeline -d $OUTDIR -p 8
+
+date

metAmos_commands/run_metAmos_CAMI_medium.sh

+#!/bin/bash -l
+
+export PATH=$PATH:/home/snarayanasamy/Work/tools/metAMOS-1.5rc3/
+OUTDIR="/mnt/md1200/snarayanasamy/metAmosAnalysis/CAMI_medium"
+
+date
+
+initPipeline -1 /mnt/md1200/snarayanasamy/IMP_data/CAMI/Medium_Complexity_Test_Dataset/MCTD.1.fq -2 /mnt/md1200/snarayanasamy/IMP_data/CAMI/Medium_Complexity_Test_Dataset/MCTD.2.fq -d $OUTDIR -i 250:500,250:500
+
+runPipeline -d $OUTDIR -p 8
+
+date