Issues · IMP / IMP

New issue

IMPiris: quality of service in slurm config

#157 · opened May 11, 2020 by Valentina Galata bug
- CLOSED
- 0
updated May 25, 2020
IMPiris: typo in localrules declaration in data_input.smk

#156 · opened May 07, 2020 by Valentina Galata bug
- CLOSED
- 1
updated May 25, 2020
IMPiris: wrong config keywords and message formatting in mongoDB.smk

#155 · opened May 07, 2020 by Valentina Galata bug
- CLOSED
- 0
updated May 25, 2020
Creation of db directory when help invoked

#106 · opened Aug 22, 2017 by Shaman Narayanasamy bug
- CLOSED
- 1
updated Aug 27, 2019
MG-only report annotation tab

#68 · opened May 31, 2016 by Shaman Narayanasamy bug
- CLOSED
- 1
updated Aug 27, 2019
Prokka setup db

#30 · opened May 29, 2015 by Yohan Jarosz Important bug
- CLOSED
- 0
updated Feb 09, 2018
Mapping metatranscriptomic set problem.

#31 · opened Jul 02, 2015 by Shaman Narayanasamy bug
- CLOSED
- 2
updated Feb 09, 2018
HTQC new version not working

#33 · opened Jul 14, 2015 by Shaman Narayanasamy bug
- CLOSED
- 2
updated Feb 09, 2018
different processces can access db at the same time

#37 · opened Jul 16, 2015 by Yohan Jarosz Important bug
- CLOSED
- 1
updated Feb 09, 2018
Quast error about internet connection

#52 · opened Sep 01, 2015 by Shaman Narayanasamy Urgent bug
- CLOSED
- 2
updated Feb 09, 2018
R3 webdev tarball unable to download

#54 · opened Sep 10, 2015 by Shaman Narayanasamy Urgent bug
- CLOSED
- 1
updated Feb 09, 2018
Prokka --setupdb fails

#17 · opened Apr 01, 2015 by Yohan Jarosz bug
- CLOSED
- 2
updated Feb 09, 2018
Variant calling not working

#18 · opened Apr 02, 2015 by Shaman Narayanasamy Important bug
- CLOSED
- 1
updated Feb 09, 2018
Benchmark folder

#19 · opened Apr 11, 2015 by Shaman Narayanasamy bug
- CLOSED
- 2
updated Feb 09, 2018
Analysis.log

#20 · opened Apr 13, 2015 by Malte Herold bug
- CLOSED
- 0
updated Feb 09, 2018
IMP report input folder

#22 · opened Apr 14, 2015 by Shaman Narayanasamy bug
- CLOSED
- 1
updated Feb 09, 2018
When working outside the current directory, path to the configfile is not propagated inside the container.

#61 · opened Nov 06, 2015 by Yohan Jarosz bug
- CLOSED
- 6
updated Feb 09, 2018
MG detuplication step not appearing in snakemake stdout.

#48 · opened Aug 24, 2015 by Shaman Narayanasamy Important Urgent bug
- CLOSED
- 7
updated Feb 09, 2018
NoFiltering rule issue

#62 · opened Nov 07, 2015 by Shaman Narayanasamy Urgent bug
- CLOSED
- 2
updated Feb 09, 2018
R script reading of GFF files

#63 · opened Dec 09, 2015 by Shaman Narayanasamy Important bug
- CLOSED
- 1
updated Feb 09, 2018