Issues · IMP / IMP · GitLab

samtools-1.9 might break host filtering step

#137 · created Sep 21, 2018 by Cedric Laczny Important Update
- 4
updated Oct 08, 2018
`metaquast` rule: ERROR! Failed downloading SILVA rRNA gene database

#126 · created Feb 14, 2018 by Fredrik Boulund IMP 2.1 Update metaquast
- 8
updated Oct 19, 2018
megahit iterations: 99-25=74 modulo 4 is 2 and not 0

#105 · created Jul 06, 2017 by Patrick May Enhancement Important Update
- 1
updated Oct 04, 2017
Initialization problems

#81 · created Dec 09, 2016 by Laurent Heirendt Update
- CLOSED
- 9
updated May 31, 2017
IMP execution outside of code directory

#60 · created Oct 28, 2015 by Shaman Narayanasamy Enhancement Important Potential request Update
- CLOSED
- 8
updated Feb 09, 2018
Update MEGAHIT

#56 · created Sep 28, 2015 by Shaman Narayanasamy Important Update Urgent
- CLOSED
- 2
updated Feb 09, 2018
Metagenomic and metatranscriptomic only options for Docker container

#43 · created Aug 11, 2015 by Shaman Narayanasamy Update
- CLOSED
- 4
updated Feb 09, 2018
Deprecate DATADIR parameter

#27 · created Apr 21, 2015 by Shaman Narayanasamy Enhancement Update
- CLOSED
- 2
updated Feb 09, 2018
Prokka 1.11

#24 · created Apr 16, 2015 by Shaman Narayanasamy Update
- CLOSED
- 1
updated Feb 09, 2018
Incorporate VizBin Java implementation

#23 · created Apr 16, 2015 by Shaman Narayanasamy Enhancement Update Urgent
- CLOSED
- 3
updated Feb 09, 2018
Handling multiple fastq files

#13 · created Apr 01, 2015 by Shaman Narayanasamy Enhancement Potential request Update
- 0
updated Dec 19, 2017